BLASTÂ
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- BLASTÂ search for term
Basic Local Alignment Search Tool. A sequence comparison algorithm optimized for speed used to search sequence databases for optimal local alignments to a query. The initial search is done for a word of length W" that scores at least "T" when compared to the query using a substitution matrix. Word hits are then extended in either direction in an attempt to generate an alignment with a score exceeding the threshold of "S". The "T" parameter dictates the speed and sensitivity of the search. (NCBI)(http://bioinfbook.org/appendix.php)
