Workshop on Phenotyping Data Management and Interoperability, 3rd April 2014, Montpellier France
A Workshop on Crop Ontology and Phenotyping Data Interoperability will be held at CIRAD in Montpellier, France on 31 March-4th April 2014. Only the presentations of the 3rd April will be public (CIRAD Campus de Lavalette, amphitheater J Alliot) and they will be focused on Phenotyping Data Management and Interoperability. Participants will include members of the Crop Ontology community and members of the GIS BV Thematic Committee “Bioinformatics and Data Management”.
Agenda
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Thursday 3rd April Phenotyping Data Day CIRAD, Amphitheatre Jacques Alliot |
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8 :30 - 9 :00 |
Registration |
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9 :00-9 :15 |
Welcome & Logistics |
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Session 6 |
Phenotyping Data Management and Interoperability Needs |
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9:15-9 :30 |
Introduction on phenotyping and meta-analysis : the example of GRISP phenotyping network |
Ken McNally, Julia Mae Pasuquin , IRRI |
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9 :30-9 :45 |
The Crop ontology |
Elizabeth Arnaud, Bioversity |
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9 :45 -10 :00 |
Annotating Phenotypes with Common Reference Ontologies for Plant |
Laurel Cooper, OSU |
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10 :00-10 :15 |
Management of phenotyping data by the French Projects ‘Future Investissement’ |
Manuel Ruiz, CIRAD |
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10:15 - 10:30 |
Questions to presenters |
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10 :30-11 :00 |
Coffee break |
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10 :15-10 :30 |
Phenome Project, the French Plant Phenotyping Network |
Pascal Neveu & Cyril Pommier , INRA |
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10 :15-10 :30 |
Data management at the UK National Plant Phenomics Centre |
Marie Neal, IBERS |
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11 :30-11 :45 |
Australian Phenotyping Platform: the Phenomics Ontology Driven Data Repository (PODD) |
Xavier Sirault , CSIRO |
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12 :30-13:00 |
Questions to presenters |
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13 :00-14 :00 |
Lunch at CIRAD restaurant |
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11:00-11:15 |
The quest for tolerant varieties: phenotyping at plant and cellular level |
Sébastien Carpentier, KUL |
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12 :15-12 :30 |
PHENOPSISDB: an example of a comprehensive information system |
Vincent NEGRE- INRA LEPSE |
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14 :30-14 :45 |
Model and data interoperability in OpenAlea for plant architecture modeling. |
Christophe Pradal , CIRAD |
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14 :45-15 :30 |
Discussion and wrap up |
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15 :30-16 :00 |
Coffee break |
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16 :00-17 :00 |
Posters |
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