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2014
Wu AG, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J et al..  2014.  Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication. Nature Biotechnology.
Piyatrakul P, Yang M, Putranto R-A, Pirrello J, Dessailly F, Hu S, Summo M, Theeravatanasuk K, Leclercq J, Kuswanhadi et al..  2014.  Sequence and Expression Analyses of Ethylene Response Factors Highly Expressed in Latex Cells from Hevea brasiliensis. PLoS ONE. 9(6):e99367-. Abstract
Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, Zheng C, Alberti A, Anthony F, Aprea G et al..  2014.  The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.. Science (New York, N.Y.). 345(6201):1181-4. Abstract
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, Poncet V, Garsmeur O, Lashermes P, Droc G.  2014.  The coffee genome hub: a resource for coffee genomes.. Nucleic acids research. Abstract
Jourda C, Cardi C, Mbéguié-A-Mbéguié D, Bocs S, Garsmeur O, D'Hont A, Yahiaoui N.  2014.  Expansion of banana (Musa acuminata) gene families involved in ethylene biosynthesis and signalling after lineage-specific whole-genome duplications.. The New phytologist. 202(3):986-1000. Abstract
Cotta MG, Barros LMG, de Almeida JD, de Lamotte F, Barbosa EA, Vieira NG, Alves GSC, Vinecky F, Andrade AC, Marraccini P.  2014.  Lipid transfer proteins in coffee: isolation of Coffea orthologs, Coffea arabica homeologs, expression during coffee fruit development and promoter analysis in transgenic tobacco plants.. Plant molecular biology. 85(1-2):11-31. Abstract
Cenci A, Guignon V, Roux N, Rouard M.  2014.  Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots.. Plant molecular biology. Abstract
Roorkiwal M, Nayak SN, Thudi M, Upadhyaya HD, Brunel D, Mournet P, This D, Sharma PC, Varshney RK.  2014.  Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers.. Frontiers in plant science. 5:248. Abstract
Fischer I, Dainat J, Ranwez V, Glémin S, Dufayard JF, Chantret N.  2014.  Impact of recurrent gene duplication on adaptation of plant genomes.. BMC plant biology. 14:151. Abstract
Piyatrakul P, Yang M, Putranto R-A, Pirrello J, Dessailly F, Hu S, Summo M, Theeravatanasuk K, Leclercq J, Leclercq J et al..  2014.  Sequence and expression analyses of ethylene response factors highly expressed in latex cells from Hevea brasiliensis.. PloS one. 9(6):e99367. Abstract
Sabot F.  2014.  Tos17 rice element: incomplete but effective.. Mobile DNA. 5(1):10. Abstract
Cai J, Liu X, Vanneste K, Proost S, Tsai W-C, Liu K-W, Chen L-J, He Y, Xu Q, Bian C et al..  2014.  The genome sequence of the orchid Phalaenopsis equestris. Nature Genetics. 47(1):65-72.
Nabholz B, Sarah G, Sabot F, Ruiz M, Adam H, Nidelet S, Ghesquière A, Santoni S, David J, Glémin S.  2014.  Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (O. glaberrima). Molecular Ecology. :n/a-n/a.
Montoya C, Cuellar T, Lopes R, Summo M, Bittencourt D, Pinaglia C, Rivallan R, Espeout-Fois S, Pitollat B, Flori A et al..  2014.  Genetic Determinism of the Fatty Acid Composition of Palm Oil in Elaeis (E. guineensis Jacq. and E. oleifera (H.B.K) Cortès) by Genetic Mapping and Differential Expression Analysis of Candidate Genes. PAG XXII.
Monat C, Tranchant-Dubreuil C, Lorieux M, Ghesquière A, Ruiz M, Sabot F.  2014.  African Rices Genome Projects : GLASS and Irigin. PAG XXII. Abstract
Lariviere D, Dufayard JF, Bocs S, This D.  2014.  Integrative System For Gene Family Gathering and Analysis In A Context of Crops’ Stress Response Study. PAG XXII.
Network SG.  2014.  The South Green Bioinformatics platform. PAG XXII. Abstract
Bocs S, Dereeper A, Gayraud T, Jamilloux V, Lashermes P, Guyot R.  2014.  Transposable Elements in the Robusta Coffee Genome (Coffea canephora). PAG XXII.
Garsmeur O, Droc G, Woltinge D, Van-Oeveren J, Martin G, Harrison B, Charron C, Van Der Vossen E, D’Hont A.  2014.  Whole Genome Profiling to Generate a Core Physical Map of the Gene Rich Part of the Sugarcane Genome. PAG XXII. Abstract
2013
Poncet V, Munoz F, Munzinger J, Pillon Y, Gomez C, Couderc M, Tranchant-Dubreuil C, Hamon S, de Kochko A.  2013.  Phylogeography and niche modelling of the relict plant Amborella trichopoda (Amborellaceae) reveal multiple Pleistocene refugia in New Caledonia.. Molecular ecology. 22:6163–78.
Riahi L, Zoghlami N, Dereeper A, Laucou V, Mliki A, This P.  2013.  Single nucleotide polymorphism and haplotype diversity of the gene NAC4 in grapevine. 43:718-724.
Dereeper A, Guyot R, Tranchant-Dubreuil C, Anthony F, Argout X, de Bellis F, Combes M-C, Gavory F, de Kochko A, Kudrna D et al..  2013.  BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution.. Plant molecular biology. 83(3):177-89. Abstract
Combes M-C, Dereeper A, Severac D, Bertrand B, Lashermes P.  2013.  Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica grown at contrasted temperatures.. The New phytologist. 200(1):251-60. Abstract
Gébelin V, Leclercq J, Leclercq J, Argout X, Chaidamsari T, Hu S, Tang C, Sarah G, Yang M, Montoro P.  2013.  The small RNA profile in latex from Hevea brasiliensis trees is affected by tapping panel dryness.. Tree physiology. 33(10):1084-98. Abstract
Coudert Y, Dievart A, Droc G, Gantet P.  2013.  ASL/LBD phylogeny suggests that genetic mechanisms of root initiation downstream of auxin are distinct in lycophytes and euphyllophytes.. Molecular biology and evolution. 30(3):569-72. Abstract