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This D, Comstock J, Courtois B, Xu Y, Ahmadi N, Vonhof WM, Fleet C, Setter T, McCouch S. 2010. Genetic Analysis of Water Use Efficiency in Rice (Oryza sativa L.) at the Leaf Level. Rice. 3:72-86.

Terol J, Conesa A, Colmenero JM, Cercos M, Tadeo F, Agusti J, Alos E, Andres F, Soler G, Brumos J et al.. 2007. Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance. BMC Genomics. 8:31-31. Abstract

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Souza GM, Berges H, Bocs S, Casu R, D’Hont A, Ferreira JE, Henry R, Ming R, Potier B, Van Sluys M-A et al.. 2011. The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome. Tropical Plant Biology. 4:145-156.

Sempéré G, Pétel A, Abbé M, Lefeuvre P, Roumagnac P, Mahé F, Baurens G, Filloux D. 2021. metaXplor: an interactive viral and microbial metagenomic data manager. GigaScience. 10

Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. 2016. Gigwa—Genotype investigator for genome-wide analyses. Gigascience. 5:25.

Sempéré G, Larmande P, Rouard M. 2022. Managing high-density genotyping data with Gigwa. Plant Bioinformatics. 2443

Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Submitted. Gigwa—Genotype investigator for genome-wide analyses. 5:25. Abstract

Sempéré G, Pétel A, Rouard M, Frouin J, Hueber Y, de Bellis F, Larmande P. 2019. Gigwa v2—Extended and improved genotype investigator. GigaScience. 8

Seguin M, Argout X, F. D, Espeout-Fois S, Garcia D, Le Guen V, Pujade-Renaud V, Weber C. 2008. GENESALB: Genetic analysis of resistance to South American Leaf Blight –SALB (Microcyclus ulei) in rubber tree (Heveaspp.). Genoplante.

Scheben A, Chan C-KK, Mansueto L, Mauleon R, Larmande P, Alexandrov N, Wing RA, {McNally} KL, Quesneville H, Edwards D. Submitted. Progress in single-access information systems for wheat and rice crop improvement. Abstract

Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N et al.. 2016. A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.. Molecular ecology resources. Abstract

Sallaud C, Meynard D, van Boxtel J, Gay C, Bès M, Brizard JP, Larmande P, Ortega D, Raynal M, Portefaix M et al.. 2003. Highly efficient production and characterization of T-DNA plants for rice (Oryza sativa L.) functional genomics. Theoretical and Applied Genetics. 106:1396-1408.

Sallaud C, Gay C, Larmande P, Bès M, Piffanelli P, Piégu B, Droc G, Regad F, Bourgeois E, Meynard D et al.. 2004. High throughput T-{DNA} insertion mutagenesis in rice: a first step towards in silico reverse genetics. The Plant Journal. 39:450–464.

Sallaud C, Gay C, Larmande P, Bès M, Piffanelli P, Piégu B, Droc G, Regad F, Bourgeois E, Meynard D et al.. 2004. High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics. The Plant journal : for cell and molecular biology. 39(3):450-64. Abstract

Sallaud C, Meynard D, van Boxtel J, Gay C, Bès M, Brizard JP, Larmande P, Ortega D, Raynal M, Portefaix M et al.. 2003. Highly efficient production and characterization of T-DNA plants for rice ( Oryza sativa L.) functional genomics. TAG. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 106(8):1396-408. Abstract

Sabot F. 2014. Tos17 rice element: incomplete but effective.. Mobile DNA. 5(1):10. Abstract

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Ruiz M, Rouard M, Raboin LM, Lartaud M, Lagoda P, Courtois B. 2004. TropGENE-DB, a multi-tropical crop information system.. Nucleic acids research. 32(Database issue):D364-7. Abstract

Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T et al.. 2017. MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Database. 2017(1)

Rouard M, Guignon V, Aluome C, Laporte M-A, Droc G, Walde C, Zmasek CM, Périn C, Conte MG. 2011. GreenPhylDB v2.0: comparative and functional genomics in plants.. Nucleic acids research. 39(Database issue):D1095-102. Abstract

Rouard M, Guignon V, Aluome C, Laporte M-A, Droc G, Walde C, Zmasek CM, Périn C, Conte MG. 2010. GreenPhylDB v2.0: comparative and functional genomics in plants. Nucleic Acids Research. Abstract

Rouard M, Carpentier SC, Bocs S, Droc G, Argout X, Roux N, Ruiz M, Pillay M, Ude G, Kole C et al.. 2012. Role of bioinformatics as a tool. Genetics, Genomics, and Breeding of Bananas. :194.

Roorkiwal M, Nayak SN, Thudi M, Upadhyaya HD, Brunel D, Mournet P, This D, Sharma PC, Varshney RK. 2014. Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers.. Frontiers in plant science. 5:248. Abstract

Robert S, Rieux A, Argout X, Carlier J, Zapater M-F. 2010. Optimized genotyping with microsatellite markers in the fungal banana pathogen Mycosphaerella fijiensis (Mycosphaerellaceae).. American journal of botany. 97(12):e130-2. Abstract

Risterucci AM, Nansot G, Grangeon R, Lepitre V, Dereeper A, Argout X, Ruiz M, Billotte N. 2008. Development of microsatellite (SSR) markers using the SAT software. 2nd International Symposium on Guava and Other Myrtaceae.

Rienth M, Torregrosa L, Sarah G, Ardisson M, Brillouet J-M, Romieu C. 2016. Temperature desynchronizes sugar and organic acid metabolism in ripening grapevine fruits and remodels their transcriptome. BMC Plant Biology. 16:164.