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2012

Déon M, Bourré Y, Gimenez S, Berger A, Bieysse D, de Lamotte F, Poncet J, Roussel V, Bonnot F, Oliver G et al.. 2012. Characterization of a cassiicolin-encoding gene from Corynespora cassiicola, pathogen of rubber tree (Hevea brasiliensis).. Plant science : an international journal of experimental plant biology. 185-186:227-37. Abstract

Cortés AJ, Chavarro CM, Madriñán S, This D, Blair MW. 2012. Molecular ecology and selection in the drought-related Asr gene polymorphisms in wild and cultivated common bean (Phaseolus vulgaris L.).. BMC genetics. 13:58. Abstract

Carrier G, Le Cunff L, Dereeper A, Legrand D, Sabot F, Bouchez O, Audeguin L, Boursiquot J-M, This P. 2012. Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L.. PloS one. 7(3):e32973. Abstract

D’Hont A, Denoeud F, Aury J-M, Baurens F-C, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M et al.. 2012. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.. Nature. 488(7410):213-7. Abstract

Maillol V, Bacilieri R, Bocs S, Boursiquot J-M, Carrier G, Dereeper A, Droc G, Fleury C, Larmande P, Lecunff L et al.. 2012. Role of Galaxy in a bioinformatic plant breeding platform. Galaxy Community Conference.

Guignon V, Droc G, Alaux M, Baurens F-C, Garsmeur O, Poiron C, Carver T, Rouard M, Bocs S. 2012. Chado controller: advanced annotation management with a community annotation system.. Bioinformatics (Oxford, England). 28(7):1054-6. Abstract

Hippolyte I, Jenny C, Gardes L, Bakry F, Rivallan R, Pomies V, Cubry P, Tomekpe K, Risterucci AM, Roux N et al.. 2012. Foundation characteristics of edible Musa triploids revealed from allelic distribution of SSR markers.. Annals of botany. 109(5):937-51. Abstract

Blenda A, Fang D, Rami JF, Garsmeur O, Luo F, Lacape JM. 2012. A High Density Consensus Genetic Map of Tetraploid Cotton That Integrates Multiple Component Maps through Molecular Marker Redundancy Check.

Cortés AJ, This D, Chavarro C, Madriñán S, Blair MW. 2012. Nucleotide diversity patterns at the drought-related DREB2 encoding genes in wild and cultivated common bean (Phaseolus vulgaris L.). Theoretical and Applied Genetics. 125:1069-1085.

Rouard M, Carpentier SC, Bocs S, Droc G, Argout X, Roux N, Ruiz M, Pillay M, Ude G, Kole C et al.. 2012. Role of bioinformatics as a tool. Genetics, Genomics, and Breeding of Bananas. :194.

2011

Leroy T, de Bellis F, Legnate H, Kananura E, Gonzales G, Pereira LF, Andrade AC, Charmetant P, Montagnon C, Cubry P et al.. 2011. Improving the quality of African robustas: QTLs for yield- and quality-related traits in Coffea canephora. Tree Genetics & Genomes. 7:781-798.

Courtois B, Greco R, Bruschi G, Frouin J, Ahmadi N, Droc G, Hamelin C, Ruiz M, Evrard J-C, Katsantonis D et al.. 2011. Molecular characterization of the European rice collection in view of association mapping. Plant Genetic Resources. 9:233–235.

Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al.. 2011. Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.. TAG. Theoretical and applied genetics. 123(6):881-95. Abstract

Garsmeur O, Charron C, Bocs S, Jouffe V, Samain S, Couloux A, Droc G, Zini C, Glaszmann J-C, Van Sluys M-A et al.. 2011. High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane.. The New phytologist. 189(2):629-42. Abstract

Amselem J, Cuomo CA, van Kan JAL, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S et al.. 2011. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.. PLoS genetics. 7(8):e1002230. Abstract

Dereeper A, Nicolas S, Le Cunff L, Bacilieri R, Doligez A, Peros J-P, Ruiz M, This P. 2011. SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.. BMC bioinformatics. 12:134. Abstract

Argout X, Salse J, Aury J-M, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN et al.. 2011. The genome of Theobroma cacao. Nature Genetics. 43(2):101-108.

Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al.. 2011. Targeted association analysis identified japonica rice varieties achieving Na+/K+ homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra. Theoretical and Applied Genetics. 123:881-895.

Gunn BF, Baudouin L, Olsen KM. 2011. Independent Origins of Cultivated Coconut (Cocos nucifera L.) in the Old World Tropics.

Souza GM, Berges H, Bocs S, Casu R, D’Hont A, Ferreira JE, Henry R, Ming R, Potier B, Van Sluys M-A et al.. 2011. The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome. Tropical Plant Biology. 4:145-156.

2010

Philippe R, Courtois B, McNally KL, Mournet P, El-Malki R, Le Paslier MC, Fabre D, Billot C, Brunel D, Glaszmann J-C et al.. 2010. Structure, allelic diversity and selection of Asr genes, candidate for drought tolerance, in Oryza sativa L. and wild relatives.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 121(4):769-87. Abstract

Dereeper A, Audic S, Claverie J-M, Blanc G. 2010. BLAST-EXPLORER helps you building datasets for phylogenetic analysis.. BMC evolutionary biology. 10:8. Abstract

Houel C, Bounon R, Chaïb J, Guichard C, Péros J-P, Bacilieri R, Dereeper A, Canaguier A, Lacombe T, N'Diaye A et al.. 2010. Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions.. BMC plant biology. 10:284. Abstract

Hippolyte I, Bakry F, Seguin M, Gardes L, Rivallan R, Risterucci AM, Jenny C, Perrier X, Carreel F, Argout X et al.. 2010. A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas. BMC Plant Biology. 10(1):65.

Garsmeur O, Charron C, Bocs S, Jouffe V, Samain S, Couloux A, Droc G, Zini C, Glaszmann JC, Van Sluys M-A et al.. 2010. High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane. New Phytologist. 189(2):629-642.