Processed file: dataset_9346.dat
Number of sequences: 14
Alignment assumed to be: Protein
New number of positions: 535 (selected positions are underlined in blue)
10 20 30 40 50 60 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA agggtccaggaggacctcgc---------------------------------------- tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU aacatattgttttacacggcgaatggcggaggagcctcgcgaaggagcgatggaggaaga tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 70 80 90 100 110 120 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cgacgatcctagcgacaggtatcgtactttcattcgttttcacttggactgaaaaatcct tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 130 140 150 160 170 180 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ccaacgacaattattctggaaaagagggagtagtttgaaaaactaaggaaacgtttgtcg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 190 200 210 220 230 240 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU attctttgtaggactagcattagcattgttggtatgcagtcgcggggtgctggggccgaa tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 250 260 270 280 290 300 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ggaacgaaacctcctccgtcaaaaggagtaaaaaaagcgcggtaaaaccagactcgaatc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 310 320 330 340 350 360 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cggcacccatagctcccggcgccaaccggagagctcgcagccgtggtgtaaaattgtggg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 370 380 390 400 410 420 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU catgcaaatgcacggttaccattaccagcaacagctgcatgtaattaagccgcggcaggg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 430 440 450 460 470 480 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gcaggacgcacgcacgcacgcacgcacggcccgcgtcagcttggagttggaccacagcag tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 490 500 510 520 530 540 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -----------cggcctttctgctttcgctttcacagtttcacggcttaccatttccttc tax2_SATIVA --ccccctcctcctcctcgtcgcacgaccagaccagcagcaccaactccctttctgcctt tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cagcagctatctagtactccttcactcactcgctcgctcgctcgctgcctctctcgctcc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 550 560 570 580 590 600 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ccatctctccctcccgccacccccctctttctccccctccgtgtctcgcctttgcagaaa tax2_SATIVA tcgctttcactgctcagtgctgctcctacacaccatttccccgtccgtccttcgcccccc tax3_ORYNI -------tccctcccgccatccccctctttctccccctccgtgtctcgcctttgcagaaa tax4_ORYRU -------tccctcccgccatccccctctttctccccctccgtgtctcgcctttgcagaaa tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gttctccgcccgctttcgctttcacggctccttaccgtttccccctcccctgggacggac tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ---ctttcactgctcaccatttcgcgtccttgcctcgccatctcgccgtcgcgggcgcct 610 620 630 640 650 660 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg tax2_SATIVA gcgtctcttttccgcacccatctgctgcagctgcgcacctttaatttgcagaaagaaaga tax3_ORYNI gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg tax4_ORYRU gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU agagcctcgctctccttttcacctcctcccctcgcctttggggcccgaacccaaccacag tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE gtttttcgcctccctccccccatctgccagactgccacgcacctttgcacaaagaaaggc 670 680 690 700 710 720 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca- tax2_SATIVA aagaaagaaagaaaggaaagcaaggcccccccgagcgcaacagctagcccaacacacctc tax3_ORYNI aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca- tax4_ORYRU aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca- tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cagccatcgggggaaccgaggaggagaaaagagggcgagcgagcgagagagggagagata tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE gccccgaggtacagtacaggtagaggtagagccgacagccgagcgagcccgggagccgaa 730 740 750 760 770 780 =========+=========+=========+=========+=========+=========+ tax1_SATIVA --------------------------gcagcagaagcagagcgggagagtgatgagggag tax2_SATIVA ctccatcaccaccgagaaggcaacgcatatcaaaagcgcgggcgcaaagcaaagataaca tax3_ORYNI --------------------------gcagcagaagcagagcgggagagtgatgagggag tax4_ORYRU --------------------------gcagcagaagcagagcgggagagtgatgagggag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT --------------------------------acagcagcggagacagagggagatacca tax11_HORVU aaaggcgagggaagggaagggaagggaaggctacagcagcggagacagagggtgggagat tax12_SORBI ------------------------------------------------------------ tax13_WHEAT -----------------------accaccaaaaacgcacaaaagcagagggacatcagta tax14_MAIZE cacctccaccagcagcaaaagcaccaccaccaccagaaccgagcgcacaaaagcgcgcgg 790 800 810 820 830 840 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tgagaccaggccagccaagc---------------------------------------- tax2_SATIVA tcagatcaggtcggcgcccc---------------------------------------- tax3_ORYNI tgagaccaggccagccaagc---------------------------------------- tax4_ORYRU tgagaccaggccagccaagc---------------------------------------- tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ccagcac-------------caggccagccag---------------------------- tax11_HORVU accataccaccagcgggcagcgcgacagcgag---------------------------- tax12_SORBI ------------------------------------------------------------ tax13_WHEAT tcaggtcggccgatcgagcgcgcgacgacgaacccctgccagtgctccct---------- tax14_MAIZE ccgggacgcgggagaaagcaacgggcagcctgtactgccggctgctgcagctaccctttc 850 860 870 880 890 900 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ----------------caggcccgggcgctcggaaagtgcg------------------g tax2_SATIVA ----------------ccgctcccggctgccgcaaagcccacccgatcgatcgatcgacg tax3_ORYNI ----------------caggcccgggcgctcggaaagtgcg------------------g tax4_ORYRU ----------------caggcccgggcgctcggaaagtgcg------------------g tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ----------------ccaggcccggcgctcggaaagtgtggagctccttcgaaggcaga tax11_HORVU ----------------ccaggcccggcgctcggaaagtgcggagc--------------- tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ----------------cccggccaggcgctcgcaaagtgcgggagtcgttgccttctcga tax14_MAIZE agtcccaattccagcccccggccaggcgctcgcaaagtgcgggagccgccctcttcgctc 910 920 930 940 950 960 =========+=========+=========+=========+=========+=========+ tax1_SATIVA agccgtttcccctctatctccactctctccagggccaggtgctc---------------- tax2_SATIVA cctcgttctcctcctcctccgaggctactctctgcagggcgctc---------------- tax3_ORYNI agccgtttcccctctatctccactctctccagggccaggtgctc---------------- tax4_ORYRU agccgtttcccctctatctccactctctccagggccaggtgctc---------------- tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT aggcggtccccg------------------------------------------------ tax11_HORVU ---cgtttcccctccacctccactctctccag---------------------------- tax12_SORBI ------------------------------------------------------------ tax13_WHEAT tctcctctcccgcttcctgtcctccatccctccctctctctcccccttactctctccagg tax14_MAIZE gtgggctctctctctctctctccgcgttctcgctccaggtc------------------- 970 980 990 1000 1010 1020 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT -----------------------------------agcaggagcaggcggcgctggacgc tax11_HORVU ------------------------------------------------------ggccag tax12_SORBI ------------------------------------------------------------ tax13_WHEAT gcgtctagctagctaaccgagctacgtcgcgcggcctccgaggctgggcgagctgagctg tax14_MAIZE ----------------------------------------gtgtacgatccgccagtacg 1030 1040 1050 1060 1070 1080 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc tax2_SATIVA ------gcttacgtctgcctctgcgtacgtgcaccgccca-------------------- tax3_ORYNI ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc tax4_ORYRU ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT caagcagccccagcccagccaggtgctcctgctcctcct-------gctctacctcgctg tax11_HORVU cgaggccacccaccccagccaggtgctggtgctcctgctctacctcgctgcgctgcgctg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT agctgagcttacgtacgtacgcgcgcacgtacac-------------------------- tax14_MAIZE tacgggccccggcggcgctcgtgcgcgggcg----------------------------- 1090 1100 1110 1120 1130 1140 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg tax2_SATIVA --------------------------------gcgcgggcgccatgtcgtccgccgc--- tax3_ORYNI gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg tax4_ORYRU gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg tax5_SORBI -------------------------------------------atgtcgtccgccgc--- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cccgccacccaccgcgtacgtacgtgcggtgcgggcgctcgccatgtcgtctcccgc--- tax11_HORVU cccgccacccacccaccgcctacgtac-gcgcgggcgctcgccatgtcgtctcccgc--- tax12_SORBI -------------------------------------------atgtcttcggcggc--- tax13_WHEAT ----------------------------ggccgcgccgccgccatgtcatcggccgc--- tax14_MAIZE --------------------------------------acaacatgtcctcggcggc--- 1150 1160 1170 1180 1190 1200 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca tax2_SATIVA ---ggggggaggaggagggtacgggggcggaggcggcg---------agcatcagcatca tax3_ORYNI gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca tax4_ORYRU gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca tax5_SORBI ---gggcgggtacggcggcggtgcggggagcggcgccg---------agccccactgcca tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------cggcgggtacggcggcgccg---------aggcccaccacca tax11_HORVU ------------------cggcgggtacggcggcgccg---------aggcccaccacca tax12_SORBI ---gggcggtggtggatacggggccggcggcggcgccg---------agcaccagcacc- tax13_WHEAT ------------------tggcgggtacgggggcggcgccgagcaccagcatcagcatca tax14_MAIZE ---------gggcggtggatacggggccggcggcgcgg---------agcatcagcacc- 1210 1220 1230 1240 1250 1260 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc tax2_SATIVA gcagcagcagc---------accacctgctgcttgggcaggcggcgg------------- tax3_ORYNI ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc tax4_ORYRU ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc tax5_SORBI cggccacggccacggcg---acttcatgctgcaccaccatgcacagcatatcgccgccc- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ccagcagcaccacggcc---acatgctgcttcataaccatgcacaccacatggcgaccgc tax11_HORVU cggcc---------------acatgctgcttcacagccatgcacaccacatggcggccgc tax12_SORBI --------------------------tgttgctggggcaggcggcgg------------- tax13_WHEAT gcatcagcagcaccaccagcaccagctgctgctgggccaggc------cgcggcgg---- tax14_MAIZE --------------------------tgttgctggggcaggccgcgggcgcgg------- 1270 1280 1290 1300 1310 1320 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag tax2_SATIVA --------------------------------ggcagctgtaccacgtgccgcagcacag tax3_ORYNI ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag tax4_ORYRU ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag tax5_SORBI --------------------------------agcagctctaccacgtgccgcagcacag tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ggccgccgcggcgtcgggcg------------ggcagctctaccacgtgccgcagcacag tax11_HORVU cgccgccgcgtcgggcg---------------ggcagctctaccacgtgccgcagcacag tax12_SORBI --------------------------------ggcagctctaccacgtgccgcagcacag tax13_WHEAT --------------------------------gccagctctaccacgtgccgcagcacag tax14_MAIZE --------------------------------ggcagctctaccacgtgccgcagcacag 1330 1340 1350 1360 1370 1380 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca tax2_SATIVA ccggcgggagaagctgcggttcccgcccgaccacccggcggag----------------- tax3_ORYNI ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca tax4_ORYRU ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca tax5_SORBI ccgtcgcgagaagctacggtttccgccggacgactcgccccca---------------ca tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ccggcgcgagaagctccggttcccgccggacgccgccgcggaggactcgccaccgacccc tax11_HORVU ccgccgcgagaagctccggttcccgccggacgccgccgcggaggactcaccgccggcccc tax12_SORBI ccgccgcgagaagctgcggttcccgcccgac----------------------------- tax13_WHEAT ccgccgcgagaagctgcggttcccgccggac----------------------------- tax14_MAIZE ccgccgcgagaagctgcggttcccgcccgacgac-------------------------- 1390 1400 1410 1420 1430 1440 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc tax2_SATIVA ----------------tcgccgccgccgccgccgcccgggtcgtg---------gccgct tax3_ORYNI tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc tax4_ORYRU tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc tax5_SORBI cgcctccgcttccgccccgcagcagcagcacgccggggtggcctggccgcctccgccgcc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT tctcgcccaccaccaccagcagcagcaccagcagcaccaggccggggc------gtggcc tax11_HORVU cctcgcc------------ccgcaccaccagcaccaccaggccggggc------gtggcc tax12_SORBI ----------------ccggccgactcgcccccgcccactgcctg---------gccggc tax13_WHEAT ----------------ccggcggactcctcctcgcccacgccgggcgcctggccgccgcc tax14_MAIZE ----------------gcggccgactcgcccccgcccactgcctg---------gccggc 1450 1460 1470 1480 1490 1500 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag tax2_SATIVA gcccccggcgttctactcctacgcgtcgtcct---cgtcatc---gtactcgccgcacag tax3_ORYNI gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag tax4_ORYRU gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag tax5_SORBI gccgccggcgttctactcctacgcgtcctcctccacgtcgtc---ctactccccgcacag tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT gcccccggccttctactcctacgcgtcctcct---cctcctc---ctactcgccgcacag tax11_HORVU gcccccggccttctactcctacgcgtcctcct---cctcctc---ctactcaccgcacag tax12_SORBI gcccccacccttctactcctacgcgtcctcgtcgacgtcgtc---ctactcgccgcatag tax13_WHEAT cacggtgcccttctactcctacgcgtcctcct---cctcctc---ctactcgccgcacag tax14_MAIZE gcccccacccttctactcctacgcttcctcgtcgacatcgtcctactactcgccgcatag 1510 1520 1530 1540 1550 1560 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc tax2_SATIVA cccga---cgctggcgcacgcgcagttggtggcg---------catgggatgccgccggg tax3_ORYNI cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc tax4_ORYRU cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc tax5_SORBI cccca---cgctggcgcaggcgcagctcgtcgtggcgcacggcctcgccccgccgccgct tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cccga---cggtgccgcagggccagcagctggtgctcaacgggctcaccgcccagcaggt tax11_HORVU cccca---cggtgccgcagggccagcagctggtgctcaacgggctcaccgcccagcaggt tax12_SORBI cccaacgccgctggcgcacgcgcagctcgtggcg---------cacgcgctacctgcagg tax13_WHEAT cccca---cgctggcgcacgccca---------------------caaccagctcctggt tax14_MAIZE cccca---cgctggcgcacgcgcagctagtagca---------cacgcgctacctgcggg 1570 1580 1590 1600 1610 1620 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc tax2_SATIVA ggccgcgacgagcggaggggcccagatcccgagccagaacttcgcgctgtcgctgtcgtc tax3_ORYNI gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc tax4_ORYRU gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc tax5_SORBI ctcgtcg---------------cagatcccgacgcagaacttcgcgctctcgctctcgtc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT caccgcg---cagcagttcccgcagatccccacgcagaacttctcgctctccctctcctc tax11_HORVU caccgcg---cagcagttcccgcacatccccacgcacaacttctcgctctccctctcctc tax12_SORBI cgccggg------------gcccagatcccgagccagaacttcgcgctctcgctctcctc tax13_WHEAT ccacgggatgccggcaggagcccagatcccgagccagaacttcgcgctctcgctgtcctc tax14_MAIZE cgccggg------------gtccagatcccgagccagaacttcgcgctctcgctctcttc 1630 1640 1650 1660 1670 1680 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg tax2_SATIVA ggcgtcctcgaaccct------ccgcccacgccgaggaggcagtttggcggcggcggcgg tax3_ORYNI cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg tax4_ORYRU cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg tax5_SORBI ctcgtcctcgaaccca------ccgcccgcgccgcccccgcagcagaggagg------gc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cgcctcgtccaaccccgccaccacgcccccggcgcccaggaagca---ggagccaggagc tax11_HORVU cgcctcgtccaatcccgccacggcgcccccgacgcccaggaagcagcaggagccgggagg tax12_SORBI ggcgtcctcgaaccct------ccgcccgcgccgcggaggcagct------------cgc tax13_WHEAT gtcctcctcgaaccct------ccgcctcagcagcggaggca------------------ tax14_MAIZE ggcgccctcgaaccct------ccgcccgcgccgcggaggcagct------------cgc 1690 1700 1710 1720 1730 1740 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg tax2_SATIVA cggcggcggggccgccgggccgtacgggcccttcacgggctacgccgccgtgctcgggcg tax3_ORYNI cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg tax4_ORYRU cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg tax5_SORBI gcacgccgcgccctcggcgcccttcgggcccttcactggctacgcggccgtgctcgggcg tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cgccgcgccggccgcgtggccgtacgggcccttcaccggctacgccacggtgctcgggcg tax11_HORVU cgccg------------ggccgtgcggtcccttcaccggctacgcctcggtgctcgggcg tax12_SORBI cgcgggggtagccacggggccgtacggcccgttcacgggctacgcggccgtcctcggccg tax13_WHEAT cctcgccggtgccaccgggccgtacgggcccttcacgggctacgcagccgtgctcgggcg tax14_MAIZE cgcgggggtagccacggggccgtacggcccgttcacgggctacgcggccgtcctcgggcg 1750 1760 1770 1780 1790 1800 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc tax2_SATIVA gtccaggttcttgggccccgcgcagaagctgctcgaggagatctgcgacgtcggcggccg tax3_ORYNI gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc tax4_ORYRU gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc tax5_SORBI ctcccgtttcctcggccctgcggagaagctgctcgaggagatctgcgatgtcgggggcgc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT atccaggttcctcggcccggcgcagaagctgctcgaggagatctgcgacgtggggggcgc tax11_HORVU atccaagttcctcgtcccggcgcagaggcttctggaggagatctgcgacgtgggaggcgc tax12_SORBI gtccaggttcctcggccccgcgcagaagctgctcgaggagatctgcgacgtgggcggacg tax13_WHEAT ctctaggttcctgggccccgcgcagaagctgctggaggagatctgcgacgtcggcggccg tax14_MAIZE gtccaggttcctgggccccgcgcagaagctgctcgaagagatctgtaacgtcggcggacg 1810 1820 1830 1840 1850 1860 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga tax2_SATIVA ccccgcgcagcttgacagggg---ctccgacgagggtttgctcgacgtagacgccatgga tax3_ORYNI tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga tax4_ORYRU tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga tax5_SORBI cgcctcgcacgtggaccggagcgtctccgacgagggcgtgctcgacgctgatccgatg-- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ggccgcgcacgccgacaccagcgtcccggacgagggcccgctcgacgcggacgccatgga tax11_HORVU ggccgcgcacgccgaccgcagcctcccggacgagggcctgctcgacgcggacacgatg-- tax12_SORBI gcccccgcacctggaccggcg---ctccgacgagggcatgctcgacatggacgccatgga tax13_WHEAT gccctcgcagctggaccgctg---ctccgacgacgggttgctcgacttggatgccatgga tax14_MAIZE gcccccgcacctggaccctct---ctccgacgagggtatgttcggcatgga--------- 1870 1880 1890 1900 1910 1920 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga tax2_SATIVA cgccgcg------ggaagcgtcgaccacgagatggacggcagcgatcgcgccgtcgcgga tax3_ORYNI cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga tax4_ORYRU cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga tax5_SORBI -------------gaagccatcgatcacgacatggacggcgccgaccgcgccgcctcgga tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cggcgccgac---gacgcggccggccacgagctggacacctccggcc------------- tax11_HORVU -------------gacgtcgccgacgacgagctggacgccgcaggcc------------- tax12_SORBI cgtggtt------ggggacgtggaccatgacatggacggcggtgaccgcgctaccgctga tax13_WHEAT cgccgcg------ggcgacgtcggccacgagatggacagcagcgaccgcgctgccgctga tax14_MAIZE ------------------------gcatggcatgggcggcgttgaccgcgctaccgctga 1930 1940 1950 1960 1970 1980 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat tax2_SATIVA cgcggtcacggtctccggcgccgagcagcagtggaggaagactaggctcatctcgcttat tax3_ORYNI cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat tax4_ORYRU cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat tax5_SORBI cgctgggccaatctccggcgccgagcagcagtggaagaagactaggcttatctccatgat tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT --------ccatgtccggcgccgagcagcagtggaagaagacgaggctcatctccatgat tax11_HORVU --------ccatgtacggcgccgagcagcagtggaagaagacgaggctcatctccatgat tax12_SORBI ggcggtcgctgtctccggcgccgagcagcagtggaggaagaccaggctcatctccctcat tax13_WHEAT gggcgtcacggtctccggcgccgagcaacagtggaggaagactaggctcatctccctcat tax14_MAIZE ggcggtcgctgtctccggcgccgagcagcagtggaggaagaccaggctcatctccctcat 1990 2000 2010 2020 2030 2040 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ggaag------------------------------------------------------- tax2_SATIVA ggaag------------------------------------------------------- tax3_ORYNI ggaagaggtgagtgagctccgctagccgcctcaattcctccttccaggtttcttgtggcg tax4_ORYRU ggaagaggtgagtgagctccgctagccgcctcaattcctccttccaggtttcttgtggcg tax5_SORBI ggaag------------------------------------------------------- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ggaag------------------------------------------------------- tax11_HORVU ggaagaggtgagctagggtaccacgtccaaatttctactctacctcgtttgcttcgatgc tax12_SORBI ggagg------------------------------------------------------- tax13_WHEAT ggaag------------------------------------------------------- tax14_MAIZE ggagg------------------------------------------------------- 2050 2060 2070 2080 2090 2100 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI accatctttttcaccttgtttcggcgttacaattatcgctactcctgggtggagaagaat tax4_ORYRU accatctttttcaccttgtttcggcgttacaattatcgctactcctgggtggagaagaat tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tgccgcgctgggactgggagcgccaagaatcttgcacatagcggtcacatcaccatggct tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2110 2120 2130 2140 2150 2160 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI cttgcacatagtggtcatgtcaccgatgcagttgcggattgcttttatttactgtggttg tax4_ORYRU cttgcacatagtggtcatgtcaccgatgcagttgcggattgcttttatttactgtggttg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ttgcttgcttttattcactgtgcttccgcggttgcatgtgcttttgatttgatgatcatt tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2170 2180 2190 2200 2210 2220 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI catgtgcttttgatttgatgatgatttcctttgctgctgatacatcttttgatttgttct tax4_ORYRU catgtgcttttgatttgatgatgatttcctttgctgctgatacatcttttgatttgttct tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tccatggctgctgttacattacatttgttcggattttccttttctcctttggccacagtg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2230 2240 2250 2260 2270 2280 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ctctcttctttttcctcgagtggtttgagcttgtacagttctgcactgttcatgatgaat tax4_ORYRU ctctcttctttttcctcgagtggtttgagcttgtacagttctgcactgttcatgatgaat tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ccgcactgctcacccccaacaatttgctgctttccttgctccttttttcctcgccaaaga tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2290 2300 2310 2320 2330 2340 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI agtggtgttcctccgcgtcttatcaccaaagattgtattttgatcggctgtttagcacta tax4_ORYRU agtggtgttcctccgcgtcttatcaccaaagattgtattttgatcggctgtttagcacta tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ttggatgttgattagtttcgccgcactaagcacaccttttccgaatgccatctacatgaa tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2350 2360 2370 2380 2390 2400 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ctgtgagtgcttgaaaagatagtcctccacatgaaattagaactaaccgtcctttcaaag tax4_ORYRU ctgtgagtgcttgaaaagatagtcctccacatgaaattagaactaaccgtcctttcaaag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tgaaaacacaatcgattattgtcctcgaacgctttggggcgataggtgatgctggaaacc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2410 2420 2430 2440 2450 2460 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tcttgagacatgacccatgggcgatgccagatgccattaattctctcttgttggtgtcct tax4_ORYRU tcttgagacatgacccatgggcgatgccagatgccattaattctctcttgttggtgtcct tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU agcaaaactttcgccggtcatgtcaagaaaaatcaagttctttcatcttccacatggtta tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2470 2480 2490 2500 2510 2520 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ctggtgagaatagtggcgctgctaaaagcttcgagctttgaaatgcgctctcctctacga tax4_ORYRU ctggtgagaatagtggcgctgctaaaagcttcgagctttgaaatgcgctctcctctacga tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU taaggatcggaggacttgaccctctcgcagcgtcctcttccaacctctgaggcaatacta tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2530 2540 2550 2560 2570 2580 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tgtcggagcatggcaattaggagtatactacatgagaatctacgtaggagtacaatgtag tax4_ORYRU tgtcggagcatggcaattaggagtatactacatgagaatctacgtaggagtacaatgtag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU catgggatgggaatctacgtacgatgtagtagaaagcttccatttatggagctcccagtc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2590 2600 2610 2620 2630 2640 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI aaagcttctatttttggaaccctctgtaaggcaattttgtttgcctgtgttcttcaatag tax4_ORYRU aaagcttctatttttggaaccctctgtaaggcaattttgtttgcctgtgttcttcaatag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ttacagtagcaggcgagcttgctggtctgacctctttattaatggcgtcttacttctata tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2650 2660 2670 2680 2690 2700 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI catctctctcccataattgggagctacgcttgctttgttcgtgtcatatccacatgaaaa tax4_ORYRU catctctctcccataattgggagctacgcttgctttgttcgtgtcatatccacatgaaaa tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gttgggaagtaggctttggctcgttgatgtcacatccacatgaaagctaaagctcgttga tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2710 2720 2730 2740 2750 2760 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI caaaagcacactgcttccttttcctaacatggatatctttttatctaatcattctttgtt tax4_ORYRU caaaagcacactgcttccttttcctaacatggatatctttttatctaatcattctttgtt tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tgccgtttatctcttactcctactaatccggctgcaattaatcacctctctcatcgt--- tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 2770 2780 2790 2800 2810 2820 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -------------------------------------------------aggtttgcaag tax2_SATIVA -------------------------------------------------acgtttgcaag tax3_ORYNI ggtagattatctctcatcgaattctaacccaacagcaatatctttttttaggtttgcaag tax4_ORYRU ggtagattatctctcatcgaattctaacccaacagcaatatctttttttaggtttgcaag tax5_SORBI -------------------------------------------------aggtttgcaag tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT -------------------------------------------------aggtgtgcaag tax11_HORVU -------------------------------------------------aggtgtgcaag tax12_SORBI -------------------------------------------------acgtttgcagg tax13_WHEAT -------------------------------------------------aagtttgcaag tax14_MAIZE -------------------------------------------------acgtttgcagg 2830 2840 2850 2860 2870 2880 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc tax2_SATIVA cgatacaggcaatactaccagcaactccaagctgtagtatcgtcctttgagactgttgcg tax3_ORYNI aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc tax4_ORYRU aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc tax5_SORBI aggtaccggctgtactaccagcaggtccagacagtgatcaactcgttcgagaccgtggcc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT aggtaccggcagtactaccagcaggtccaggccgtgatcgcgtcgttcgagagcgtggct tax11_HORVU aggtaccggcagtactaccagcaggtccaatccgcgatcgcctcgttcgagacggtcgcc tax12_SORBI cgatacaagcagtactaccagcagctgcaatctgtgatctcctcgtttgagactgttgcg tax13_WHEAT cgatacaggcaatactaccagcagctccaagctgtgatctcctcgtttgaaaccgtcgcc tax14_MAIZE cgatacaaacaatactaccagcagctgcaatctgtgatctcctcgtttgagacggtttcg 2890 2900 2910 2920 2930 2940 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc tax2_SATIVA ggtctgagcaatgctgctccttttgcttccatggctcttaggacaatgtcgaagcatttc tax3_ORYNI gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc tax4_ORYRU gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc tax5_SORBI gggttcagcaacgctgccccattcgcggcgatggcgctgagagccatggcgaagcacttc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT gggttcagcaacgccgccccgttcacggcgctggcgctgagggtgatggccaggcacttc tax11_HORVU gggttcagcaacgccgccccgttcacggcgctggccctgagggtgatggccaagcacttc tax12_SORBI gggctgagcaacgccgccccctttgcttccatggctcttcggacaatgtcgaagcatttc tax13_WHEAT gggctgagcaacgccgccccctttgcctccatcgctctccggacgatgtcgaagcatttc tax14_MAIZE gggctgagcaacgccgtcccctttgcttccatggctcttcggacaatgtctaagcatttc 2950 2960 2970 2980 2990 3000 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg tax2_SATIVA aagtatttgaagggcattatactgaaccagctgcgcaatacgggcaagggtgctac---a tax3_ORYNI aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg tax4_ORYRU aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg tax5_SORBI aagtgcctgaagagcatgatactgagccagctgcgcaacac---caaggtcgctgccggc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT aggtgcatcaagggcatgatactcagccagctgcgcaacaccagcaagatgccggtcaag tax11_HORVU aagaccatcaaggagatgatactgagccagctgcgcaacaccagcaagatgccggtcaag tax12_SORBI aagtgtctcaaggaaatgataatgagccaattaaggaacacaagcaaggttgtcgccaat tax13_WHEAT aagtacctaaagagcaccatacagagccagctgcgcaacaccagcaaggtggccgccggg tax14_MAIZE aagttcctgaaggggatgataatgagccaattacggaacacaagcaaggtcgctgccagt 3010 3020 3030 3040 3050 3060 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc tax2_SATIVA aaagatggtctcggcaaggaagacacaacaaactttgggct---------tatgggcggc tax3_ORYNI aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc tax4_ORYRU aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc tax5_SORBI aaggaggggctcagcaaggacatcgtcatg---ttcgggctcgc------tggcggcagc tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ga---aggcatgagcaaggacatcaccatc---ttcggcctcgg------cggcggcggc tax11_HORVU gggtcgtccatgagcaaggacatcaccatc---ttcggcct---------cggcggcggc tax12_SORBI ga---tggtattggcaaagacgatatggctaactttgcgct---------tatgggtggt tax13_WHEAT aaagacagcctcggcaaggaagacatggccaacttcgggct---------catgggcggc tax14_MAIZE ga---tggtattggcaaggatgatatggcgaactttgcgct---------tatgggtggt 3070 3080 3090 3100 3110 3120 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac tax2_SATIVA ggcgc---------tggcctactaaggggaaacaatgtgaattcgtttagccaacctcac tax3_ORYNI ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac tax4_ORYRU ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac tax5_SORBI gcggc---------tgccctccagagagctagcagcatggccgccttcggccagccgcac tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ggcgcccccgtcggcggcttccagaggggtggcagcgtgaacggcttcggccagccgcac tax11_HORVU ggcgcccccgtcggcggcttccagagagggagcagcgtgaacggcttcggccagccgcac tax12_SORBI ggagc---------aggcctcctgaggggaaacaatgtgaacgcattcggccagcctcac tax13_WHEAT agcgc---------cgccctcatgaggggaggcaacgcgaacgcgttcagccagccccac tax14_MAIZE ggagc---------agaccacctgaggggaaacagcgtgaacacgttcagccaggctcac 3130 3140 3150 3160 3170 3180 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttttacgcgcgtgg tax2_SATIVA aacatatggcgcccgcaaagagggctaccagagcgtgctgtttcggttcttcgtgcatgg tax3_ORYNI aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttctacgcgcgtgg tax4_ORYRU aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttctacgcgcgtgg tax5_SORBI aacatctggcggccacagagagggctgccggagcgcgcagtgtctgtcctccgcgcttgg tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT aacatctggcgcccccagaggggcctccccgagcgctccgtcacggtcctccgggcttgg tax11_HORVU aacatctggcgcccccagaggggcctccccgagcgctccgtcaccgtcctccgggcttgg tax12_SORBI aacatttggaggcctcaaagagggcttcctgagcgtgcagtgtctgtgcttcgctcgtgg tax13_WHEAT aacatttggcggccacagaggggactcccagagcgcgcagtgtcggttcttcgcgcctgg tax14_MAIZE aacatttggaggcctcaaagagggcttcctgagcgtgcagtgtctgttcttcgctcatgg 3190 3200 3210 3220 3230 3240 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ctgttcgaacacttcctgcaccc------------------------------------- tax2_SATIVA ctattcgaacacttcctgcaccc------------------------------------- tax3_ORYNI ctgttcgaacacttcctgcacccgtaagccctttgatcttcttattgctttatggttaac tax4_ORYRU ctgttcgaacacttcctgcacccgtaagccctttgatcttcttattgctttatggttaac tax5_SORBI ctcttcgaacacttcctgcaccc------------------------------------- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ctcttcgagcacttcctgcaccc------------------------------------- tax11_HORVU ctcttcgagcacttcctgcacccgtaagtttctttcttatccaatccactcaactaatta tax12_SORBI ctgttcgagcacttcttacatcc------------------------------------- tax13_WHEAT ctgttcgagcacttcttgcatcc------------------------------------- tax14_MAIZE ctgttcgagcacttcctacatcc------------------------------------- 3250 3260 3270 3280 3290 3300 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tctgggttcattagctgcacgcattccaagacaatgatgatgatgctacagttgcttgct tax4_ORYRU tctgggttcattagctgcacgcattccaagacaatgatgatgatgctacagttgcttgct tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ctgctagctcatggtaattagcattactgcttcactagacgacgtacgtactccgcgcct tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3310 3320 3330 3340 3350 3360 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ttagatgaggataacagtagtccctaagcatttgtggtgagtgtggttgttcctttttga tax4_ORYRU ttagatgaggataacagtagtccctaagcatttgtggtgagtgtggttgttcctttttga tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ttagaagataataatgcttctatgcatgatggtgccacatccacatgattatgctgggcc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3370 3380 3390 3400 3410 3420 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tatgatcagtagtacgtgacactggaaccgtggggttgatccgttgatggtttggtgata tax4_ORYRU tatgatcagtagtacgtgacactggaaccgtggggttgatccgttgatggtttggtgata tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tggacctgcggttgttttagctgattgcaagcaatcctcggtgtcgaaatcattaggatg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3430 3440 3450 3460 3470 3480 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI gcaagcgaccctgcctgtctgatagaaggctatggcctcatgcaggcatggcttccaatc tax4_ORYRU gcaagcgaccctgcctgtctgatagaaggctatggcctcatgcaggcatggcttccaatc tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gatggatggccgagcatgcatgatcgagtgtcatggcatggcttagcttggcttggcttg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3490 3500 3510 3520 3530 3540 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI catcattaacataacttttaaacctgtacctaactgtgtgttgagctgtactactagaga tax4_ORYRU catcattaacataacttttaaacctgtacctaactgtgtgttgagctgtactactagaga tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gcttggcatccaaatcattctattggagctaataagatggcaagccacagctttttaagg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3550 3560 3570 3580 3590 3600 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tcatactttcgacttggtgatctaaatagtggcattcctgctgcttgtttgatgcattct tax4_ORYRU tcatactttcgacttggtgatctaaatagtggcattcctgctgcttgtttgatgcattct tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ctttgttcattttgagctgtgcacatcatcaatccatttgctaacagtctaggtcctccg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3610 3620 3630 3640 3650 3660 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI t----------------------------------------------------------- tax4_ORYRU t----------------------------------------------------------- tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ttgcatcttttcttagatcctgacatttacatgactttccaactatcattaggtgagcgg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3670 3680 3690 3700 3710 3720 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ctttaaggatttggttagggcgtcctaattatacttatgtgcttgcttattttgtcatgc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3730 3740 3750 3760 3770 3780 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU actgactgagaaacaacttgcgagtaagcttacttctaatgcagttttagggggcaccca tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3790 3800 3810 3820 3830 3840 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cctgtaggaagatgaaacatcatcattgttttggttgttttgcatactacatcttgtagt tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3850 3860 3870 3880 3890 3900 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------aatcacgtattaacttcctggatttgttgtttctgg tax4_ORYRU ------------------------aatcacgtattaacttcctggatttgttgtttctgg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU acaatcgttttttccatgatgtaagacctggtggttacatctggttgattggtataatgt tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3910 3920 3930 3940 3950 3960 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ctgtaatgtatgaatgtggtggcccggcttctcataagtagagtggcttttagaacacgt tax4_ORYRU ctgtaatgtatgaatgtggtggcccggcttctcagaagtagagtggcttttagaacacgt tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tagcatattcagttgttgttaattataactttataatgctagagcctttccatctccaac tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 3970 3980 3990 4000 4010 4020 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI taatgctggaattaacttgccagatgggcattacttcgaactaaatcttagaagtacata tax4_ORYRU taatgctggaattaacttgccagatgggcattacttcgaactaaatcttagaagtacata tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tggatttggtattatattctgtaccctttattcattattgctgccaatatttcaaagctc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4030 4040 4050 4060 4070 4080 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ccttaggctataataagcatcatcataatgtagtttgtttggcatattctttttagtttt tax4_ORYRU ccttaggctataataagcatcatcataatgtagtttgtttggcatattctttttagtttt tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tagaaagaaaagactgataattgtcgattcatgtccttttgttagatcacacatccacca tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4090 4100 4110 4120 4130 4140 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tgtagtatgatcattttgcattatatatatgatctaaaggctgtagctaagccctactgg tax4_ORYRU tgtagtatgatcattttgcattatatatatgatctaaaggctgtagctaagccctactgg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU attcctggatttaattaacttgccctttgcaaaagaaaagggcctacttggatggtgcta tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4150 4160 4170 4180 4190 4200 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tggttacatcaagttgattgacatgtgctcgagatattcagtttgagataattagtacag tax4_ORYRU tggttacatcaagttgattgacatgtgctcgagatattcagtttgagataattagtacag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU gactgataagagaaattctttaagatcgaacctttatttttgagatgttgcttggagtta tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4210 4220 4230 4240 4250 4260 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tagtttagtgctagccattttcatccagtaaggggtttgtctgtctgtttattactttaa tax4_ORYRU tagtttagtgctagccattttcatccagtaaggggtttgtctgtctgtttattactttaa tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tgtatgttcagaccgaataaacaaaccatgacaggcaccagcacaataattttctttgtt tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4270 4280 4290 4300 4310 4320 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI aaaaaggatcagtcatcatctttaaaaaaaagtcactgaaatccattatttgtcagatgt tax4_ORYRU aaaaaggatcagtcatcatctttaaaaaaaagtcactgaaatccattatttgtcagatgt tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU cccctcatctaacactaacctggcttgttttctagtacaccttttctattcactctgggc tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4330 4340 4350 4360 4370 4380 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tggtcctagtgttattagttcccgtattgatcaaatcctttgtaagcttcgacttggaag tax4_ORYRU tggtcctagtgttattagttcccgtattgatcaaatcctttgtaagcttcgacttggaag tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU attcaaatataattgttagatccccacaatcggtgcttagatttaacttgctcttaaaaa tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4390 4400 4410 4420 4430 4440 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI atgtgtttgcctacatctttgcttggatattcgccatgtaaaatatttgttgtgatcctg tax4_ORYRU atgtgtttgcctacatctttgcttggatattcgccatgtaaaatatttgttgtgatcctg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU aggtcttcttggatggcgctagactgataagagaaattctctaagatcaaaaactttgtt tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4450 4460 4470 4480 4490 4500 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI taaaccatcgttaagcatgcacatcacaagtgtcttttgtaatagcggaaatttcttgat tax4_ORYRU taaaccatcgttaagcatgcacatcacaagtgtcttttgtaatagcggaaatttcttgat tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU tctagggcggagttatttgcaatgttaaagactgaataaaaagctatgacaggcacctca tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4510 4520 4530 4540 4550 4560 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ------------------------------------------------------------ tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI tatttgattttgcgctatatctggtactttgttctttgcatcagtgacattttcagattc tax4_ORYRU tatttgattttgcgctatatctggtactttgttctttgcatcagtgacattttcagattc tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ccctaacctggctttgttttgcactcattttctactggcattcgtctgatatttgggttg tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 4570 4580 4590 4600 4610 4620 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -----------gtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg tax2_SATIVA -----------gtatccaactgacagcgataagcagatgcttgctaaacagacaggatta tax3_ORYNI caatcgtgcaggtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg tax4_ORYRU caatcgtgcaggtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg tax5_SORBI -----------atatcctactgatggagacaagcaaatgcttgctaaacagacgggttta tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT -----------gtatcctaccgatggcgacaagcaaatgctggccaagcagactggccta tax11_HORVU aaaccttgcaggtatcctaccgatggcgacaagcaaatgctggccaagcaaactggttta tax12_SORBI -----------gtatccaactgatagtgacaagcagatgctggctaaacagacaggctta tax13_WHEAT -----------gtacccaactgatagcgacaagcaaatgttggctaaacaaacaggctta tax14_MAIZE -----------gtacccaactgatagtgacaagcagatgctggctaaacagacaggccta 4630 4640 4650 4660 4670 4680 =========+=========+=========+=========+=========+=========+ tax1_SATIVA acacgcaaccag------------------------------------------------ tax2_SATIVA actaggaaccag------------------------------------------------ tax3_ORYNI acacgcaaccaggtaaatagaaatgcttctaggtgtgttcaagaatagattgcacagtat tax4_ORYRU acacgcaaccaggtaaatagaaatgcttctaggtgtgttcaagaatagattgcacagtat tax5_SORBI acacggaaccag------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT acaaggaatcag------------------------------------------------ tax11_HORVU acaaggaatcaggtaagcagcaactaaagctggggactgttagcactagcatgtcatttt tax12_SORBI acaaggaaccag------------------------------------------------ tax13_WHEAT acgaggaatcag------------------------------------------------ tax14_MAIZE actaggaaccag------------------------------------------------ 4690 4700 4710 4720 4730 4740 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -----------------------------------------------------------g tax2_SATIVA -----------------------------------------------------------g tax3_ORYNI atcaggctagattgttttgtttacaggacattttgattgaatttgtgatgctggtgcagg tax4_ORYRU atcaggctagattgttttgttttcaggacattttgattgaatttgtgatgctggtgcagg tax5_SORBI -----------------------------------------------------------g tax6_ORYME -----------------------------------------------------------g tax7_ORYGU -----------------------------------------------------------g tax8_ORYBA -----------------------------------------------------------g tax9_ORYLO -----------------------------------------------------------g tax10_WHEAT -----------------------------------------------------------g tax11_HORVU gtttctggaacttactgtagttgacatgttggtgggttaatgggtgtcgtgcag-----g tax12_SORBI -----------------------------------------------------------g tax13_WHEAT -----------------------------------------------------------g tax14_MAIZE -----------------------------------------------------------g # 4750 4760 4770 4780 4790 4800 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc tax2_SATIVA tatcgaactggtttatcaatgcaagggttaggctctggaagccaatggttgaagaaattc tax3_ORYNI tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc tax4_ORYRU tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc tax5_SORBI tatcaaactggtttattaatgcaagggttcgtctttggaagccaatggtggaggaaatcc tax6_ORYME tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc tax7_ORYGU tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc tax8_ORYBA tatcgaactggtttatcaacgcgagggttaggttgtggaagccaatggtggaagaaattc tax9_ORYLO tatcgaactggtttatcaacgcaagggtcaggttgtggaagccaatggtggaagaaattc tax10_WHEAT tgtcgaactggttcatcaacgcgagggtgcggctctggaagccaatggtggaggagatcc tax11_HORVU tgtcgaactggttcatcaacgcgagggtgaggctctggaagccaatggtggaggagatcc tax12_SORBI tgtcaaattggtttatcaatgcaagggtgcggctctggaagcccatggtggaagaaatcc tax13_WHEAT tctcaaactggttcatcaacgcaagggttagactctggaagccaatggtggaagaaatcc tax14_MAIZE tgtcaaactggtttatcaacgcaagggtgcggctctggaagcccatggtggaagagatcc ############################################################ 4810 4820 4830 4840 4850 4860 =========+=========+=========+=========+=========+=========+ tax1_SATIVA acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax2_SATIVA acaacctcgagatgag---gcagctgcagaagaat---ccgtctcttgacaagaat---c tax3_ORYNI acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax4_ORYRU acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax5_SORBI acaacctcgagatgag---gcaggtgcacaaacac---cctgttctcgacaaggga---c tax6_ORYME acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax7_ORYGU acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax8_ORYBA acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c tax9_ORYLO acaacctagagatgag---gcaaatgcacaagcac---tcagtggttgacaagggt---c tax10_WHEAT acaacctggagatgag---gcaggtccacaagcac---tcgccgcacgacaagggccagc tax11_HORVU acaacctggagatgag---gcaggtgcacaagcag---tcaccgcacgacaatggcagcc tax12_SORBI acaacctggagatgcg---gcaggtgcagaagaac---acatcggtggacaagaat---c tax13_WHEAT acaacctggagatgcg---gcaggggcataagagc---tcggccgccgacaagaat---c tax14_MAIZE acaacctggagatgcggcagcagctgcagaagaacacgtcggcggtggacaagacc---c ################ ################ ################## # 4870 4880 4890 4900 4910 4920 =========+=========+=========+=========+=========+=========+ tax1_SATIVA agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax2_SATIVA agctctccatgcagca-c--acccaacattcgtc------------------ggacagca tax3_ORYNI agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax4_ORYRU agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax5_SORBI agcacgtgttgcatcaccaaacccagcattcgtc------------------tgagagca tax6_ORYME agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax7_ORYGU agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax8_ORYBA agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax9_ORYLO agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca tax10_WHEAT agaacggcgtccacggccaggctcaccaacactcgtcgcagcagcagcagcagcagcgca tax11_HORVU agcacggcgtccacggccatgctcaccagccatcgtcacagcagcagcagcagcagcgca tax12_SORBI aacttggcatgcagca---gattcagcactcgac------------------ggacagca tax13_WHEAT agctcggcgtgcagcagcaaacccagcagcattcgcc---------------ggacagca tax14_MAIZE aactcggcatgcagcagctgatccagcactcgtc-------------------------- ################################## ######## 4930 4940 4950 4960 4970 4980 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataactc tax2_SATIVA gcgggaagccctgtgatccatcaaactcgctgcaagggcaaagta---gcagcatgacca tax3_ORYNI gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc tax4_ORYRU gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc tax5_SORBI gtggaaaaccctctgatccttccgactctcatctcggccaaagca---gcagcctcacta tax6_ORYME gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataactc tax7_ORYGU gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc tax8_ORYBA gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc tax9_ORYLO gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc tax10_WHEAT gcggcaagcgctccgagccctgcgactcgcaccccggccagagca---gcggcgtcacca tax11_HORVU gcggcaagcgctccgagccctgcgactcgcacctcggccagtgca---gcggcgtcacca tax12_SORBI gtgggaagctttctgacccttcaaactctcagcgtgggcaaagca---gcggcatgacaa tax13_WHEAT gcgggaggccctccgatccttcgaactcacaccaagggcaaagca---gcagcatgtcac tax14_MAIZE -----gg-----------caaactcccggcagcgggggcaaagcagcggcggcacgacga ############################################# ############ 4990 5000 5010 5020 5030 5040 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax2_SATIVA ggaatca---------------cagcatctccgcctccc---------ggcacatcgagg tax3_ORYNI ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax4_ORYRU ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax5_SORBI ggaacca---------------caacatccctgcgtccc---------agggttttgcag tax6_ORYME ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax7_ORYGU ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax8_ORYBA ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax9_ORYLO ggaacca---------------caacaccgctgcctccc---------agggcttcccgg tax10_WHEAT ggaaccaccaccaccacaacgccgccgccgccgcctcctcccacggtggtggcttcccgg tax11_HORVU ggaaccaccaccaccacag---caaccctgcggcctcctcccatggtggcggcttcccgg tax12_SORBI gaaacct---------------cagctctccggcatcac---------gccatatccaag tax13_WHEAT agaaccg---------------cagcgcccacgctgcac------atcggcacatccaga tax14_MAIZE gaaacca---------------------------------------------------ag ####### ############### ###### 5050 5060 5070 5080 5090 5100 =========+=========+=========+=========+=========+=========+ tax1_SATIVA atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax2_SATIVA acggcct---ctcccagatgccccatgacatc---tccggt------------------- tax3_ORYNI atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax4_ORYRU atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax5_SORBI atgagct---ctccgagatgtcccactctattcagcagggg------------------- tax6_ORYME atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax7_ORYGU atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax8_ORYBA atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax9_ORYLO atgagct---ctcccagatgtcccagtccatc---caggga------------------- tax10_WHEAT acgacct---ctcccagatgtcccactccatgcagcagggc------------------- tax11_HORVU acgacct---ctcccagatgtcccactccatgcagcagggc------------------- tax12_SORBI acgagct---ctcccagatgccccacgacatg---ccaggc------------------- tax13_WHEAT gcgagct---ctccccgatgacccacgacatg---ccggga------------------- tax14_MAIZE acgagctgcccccgcggatgccccacgacatg---gcaggccagggccagcagcagcagc ####### ###################### 5110 5120 5130 5140 5150 5160 =========+=========+=========+=========+=========+=========+ tax1_SATIVA --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax2_SATIVA --caggtgagcttcgcatacaacgggct---cgccgc----------------------- tax3_ORYNI --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax4_ORYRU --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax5_SORBI --caggtaacctttgcatacaatgggctgtcgacggc----------------------- tax6_ORYME --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax7_ORYGU --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax8_ORYBA --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax9_ORYLO --caggtgagcttcgcatacaacgggct---gacctc----------------------- tax10_WHEAT --caggtgaccttcgccgggtacggcgcgctgccctc---------------ccagcagc tax11_HORVU --caggtgaccttcgccggctacggcgcgctgccctcccagtcccagcagcaccagcacc tax12_SORBI --caggtgagctttgcttacaatgggctccccac-------------------------- tax13_WHEAT --caggtgagcttcgcgtacaacggcagcgggatggc---------cgcgcaccaccagc tax14_MAIZE agcaggtgagcttcgcttacgctgggctccccgcgca----------------------- ########################## 5170 5180 5190 5200 5210 5220 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax2_SATIVA -gcatcacagcatcgcgatggcgcaccaccaccaacc---tgacctcattggcaccggtg tax3_ORYNI -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax4_ORYRU -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax5_SORBI -acaccacagcctcgcttcgtcgcagcaccaccagcaggcagggccaatgagtggcattg tax6_ORYME -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax7_ORYGU -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax8_ORYBA -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax9_ORYLO -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta tax10_WHEAT agcacggcagcatggcgtcgccgcagcaccaccacca---ccatcacgtcggcgtcggcg tax11_HORVU agcacagcagcatggcgtcgccgcagcacccccatcatcagcatcacgtcggcgctgccg tax12_SORBI -acaccacggtcttgcgctgtcacacccc---cagcaagctgaagcagtcagcgccggca tax13_WHEAT accaccacggcattgcactgtcgcatccccatcagca------ggtcgaaggcgcgagcg tax14_MAIZE -ccaccacggcctcgcgctgtcgcacccccagcagcaagcggaagcggtcagc------- ################################### #################### 5230 5240 5250 5260 5270 5280 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax2_SATIVA gtgcc---------------gcgaatgctggcggtgtctcactcacccttggccttcacc tax3_ORYNI tcgga---------------ggcagcaatggcggtgtctccctcacccttggtcttcacc tax4_ORYRU tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax5_SORBI gtggt---------------gcggggaacggtggcgtctccctcacccttggcctccacc tax6_ORYME tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax7_ORYGU tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax8_ORYBA tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax9_ORYLO tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc tax10_WHEAT tcggcggggcggtgaatgctggcggcggtggcggcgtgtcgctcaccctcggcctccacc tax11_HORVU gggcg---------------ggtaacggcggcggcgtgtcgctcaccctcggcctccacc tax12_SORBI ttggccttggcggcgtggctgccggcggtggcggcgtttccctcacactcggccttcacc tax13_WHEAT gcgcc---------------gggagcagcggcggcgtctccctcaccctcggcctccacc tax14_MAIZE --------------------gccgtcggcggtggcgtttcgctcacgctgggccttcacc ### ######################################## 5290 5300 5310 5320 5330 5340 =========+=========+=========+=========+=========+=========+ tax1_SATIVA agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax2_SATIVA agaacaataaccgagcttacattgctgagccccttccggccgcgcttccgctcaatcttg tax3_ORYNI agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax4_ORYRU agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax5_SORBI agaacaaca---gagtctgtattgccgagccactcccggagtccctccctcccaacctcg tax6_ORYME agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax7_ORYGU agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax8_ORYBA agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax9_ORYLO agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag tax10_WHEAT agaacaaca---gggtctgcttcggggagccgctgccggc------------caacctgg tax11_HORVU agaacaaca---gggtctgcttcggggagccgctgccggc------------caacctcg tax12_SORBI agaacaaca---ggacttacattgccgagccacttccggccgcgctcccgctcaacctcc tax13_WHEAT agaacaacc---gggcctacatcgccgagcccctcccggcggcgctcccgctcaacctcg tax14_MAIZE agaacaacaaccggacctacgtcgccgagcctctcccggccgcgctcccg---------- ######### ################################################ 5350 5360 5370 5380 5390 5400 =========+=========+=========+=========+=========+=========+ tax1_SATIVA ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax2_SATIVA cccatcgtttcggactggaggacgtt---agtgatgcctacgtgat------gagctcat tax3_ORYNI ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax4_ORYRU ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax5_SORBI ctcaccgttttgggctggaggaggtc---agcgacccctacatgat------gggctctt tax6_ORYME ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax7_ORYGU ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax8_ORYBA ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax9_ORYLO ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat tax10_WHEAT cgcaccggttcgggctggaggacgtcgtcagcgacccctacgtgat------gggctcgt tax11_HORVU cgcaccggttcgggctggaggacgtcgtgagcgacccctacgtgat------gggctcct tax12_SORBI cgcaccgttttgggctggaggacgtg---agcgacgcctacgtgat------ggggtcat tax13_WHEAT cgcaccggttcgggctggaggacgtc---agcgacgcctacgcgat------ggcggcct tax14_MAIZE --caccgtttcgggctggaggacgtg---agcgacgcctacgtgatgcaggggacgacgt ########################## ################# 5410 5420 5430 5440 5450 5460 =========+=========+=========+=========+=========+=========+ tax1_SATIVA t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg tax2_SATIVA t---tggtggtcaggaccggcatttcaccaaggagatcggtggccat---ttgctccatg tax3_ORYNI t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg tax4_ORYRU t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg tax5_SORBI t---cggaaaccaggaccggcatttcggcaaggagatgggtggccat---ttggtgcatg tax6_ORYME t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct----- tax7_ORYGU t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct----- tax8_ORYBA t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct----- tax9_ORYLO t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct----- tax10_WHEAT t---cggcggccaggaccggcacttcgccaaggagatcggcggccac---ctcctccatg tax11_HORVU tcggcggcggccaggaccggcacttcgccaaggagatcggcggccac---ctgctccacg tax12_SORBI tcggcggcggccaggaccgtcatttcaccaagggaataggtggccaccatttgctccatg tax13_WHEAT cgttcggaggccaggaccggcacttcaccaaggaaatgggcggccat---ctgctccatg tax14_MAIZE cgttcggcggccaggaccgccatttcggcaaggggatgggcggccaccattttgtgcatg ########################################### 5470 5480 5490 5500 5510 5520 =========+=========+=========+=========+=========+=========+ tax1_SATIVA attttgtcgggtgattgtggc--------------------------------------- tax2_SATIVA actttgttggttgaagagcag--------------------------------------- tax3_ORYNI attttgtcgggtgattgtggc--------------------------------------- tax4_ORYRU attttgtcgggtgattgtggc--------------------------------------- tax5_SORBI actttgttggctga---------------------------------------------- tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT atttcgtcgggtgatcgacgc-----------cgccggtgctcagctcgctccccgctga tax11_HORVU atttcgtcgggtgaccgatgctcagctcagctcagctccgctcggcgcgctccacgctga tax12_SORBI actttgttggttgatctcgta--------------------------------------- tax13_WHEAT acttcgttgggtgatcgatga--------------------------------------- tax14_MAIZE acttggtcggctgatctcgtt--------------------------------------- 5530 5540 5550 5560 5570 5580 =========+=========+=========+=========+=========+=========+ tax1_SATIVA -------------------------------------------------------tgctg tax2_SATIVA --------------------------------------------atat---gattgtttc tax3_ORYNI -------------------------------------------------------tgctg tax4_ORYRU -------------------------------------------------------tgctg tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT tgcacattgttgtaatgtacgcacgctacgcactgctagtatgctag----gatggtata tax11_HORVU tgcacattgttgtaatgtacgcact-----tactgctgataatcctag---gctggtata tax12_SORBI ---ttggaagtgtgttgtcagcatgcat----gtattgtattattagg---ggta----- tax13_WHEAT ----------------acaaacacatgcatgattgctccattgctgggatcatcagcatg tax14_MAIZE ---cttgcgac-tgttgtcggcatgcattgtatcatactattgttagg---ggcagcaca 5590 5600 5610 5620 5630 5640 =========+=========+=========+=========+=========+=========+ tax1_SATIVA cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtatat tax2_SATIVA accaaggagatcggtggtgattattgtaggatgcagatgtatgatctacctatattgtag tax3_ORYNI cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtat-- tax4_ORYRU cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtat-- tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT tagtaagtcaatcatcacaatcacttggcggcttggctcgatgatcggtcgacatgaaca tax11_HORVU t---aagtcgatcatgaaaatcacttggcggcttggcttgacgatcgg-catgaagaaca tax12_SORBI -----ggacagtcgaagagaccatttaatttggtcgtccatgcatccaagaatgctgtcg tax13_WHEAT caacaacatgcagatgagatcttgtatgctggccacgtgtattgtactagaagtaggatg tax14_MAIZE ggcacgcacagtggaagagacca-----------------------------------ga 5650 5660 5670 5680 5690 5700 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aagtcaatcacttggcgacatggcttgatgatcagtctgaatcaatttgttcggagggtg tax2_SATIVA ttggaagtaggaggt-------------------------------------gaagaaaa tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT cggtcgattcctttg-------------------------------------gagggcgg tax11_HORVU cggtcgattcctttg-------------------------------------gagggcgg tax12_SORBI atatttgacaatg-----------------------------------------tgaggg tax13_WHEAT atgaaggtaacaagg-------------------------------------gtgcattg tax14_MAIZE atatttgacagtgtg-------------------------------------gatgaggg 5710 5720 5730 5740 5750 5760 =========+=========+=========+=========+=========+=========+ tax1_SATIVA aaaaaacattgatcttcccttcatgtagatccaggtatgctgtcaaatatttgacacctt tax2_SATIVA gaggggcattggcacgcctgtcgtagatccacgaatgcttgtcgatattt---------- tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT atgaaacattgacatgccctc--------------------------------------- tax11_HORVU atgaaacattgacatgccc----------------------------------------- tax12_SORBI ctatagagggcatg------acataccgttgaagatctgttccagttgt----------- tax13_WHEAT gtacaccgtacatatgcttctcgtgtagaccctggaatgctgtcaatatttgacagagtg tax14_MAIZE ctatagagggcacgcatggcccgtagcgttgaagatctgttccagttgt----------- 5770 5780 5790 5800 5810 5820 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gcgggctatagagagattgacaataccttcccaaggcagtaaagttgtgtaccatttgtt tax2_SATIVA ----------gacattgtggggctatagagagcatatgactatacctttgaagacctgtt tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ------------------------------------------------------------ tax12_SORBI --------------------------------------------------------atgt tax13_WHEAT gggctacatagagagcatgcagtgcagagagaagtactacctttaaaaggcctgttgtag tax14_MAIZE --------------------------------------------------------atgt 5830 5840 5850 5860 5870 5880 =========+=========+=========+=========+=========+=========+ tax1_SATIVA atatgcttagattaatccttgtactgtgatgacgaaatgggcttagctggcagagaaaaa tax2_SATIVA tgtagtgttgttccctatttgttctg---------------------------------- tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------tctcccatgtacta---------------------------------- tax11_HORVU ------------tcacatgtgtactc---------------------------------- tax12_SORBI tgtagagttgaaccctatttgttcta---------------------------------- tax13_WHEAT catgcagttcttccctatttgttctg---------------------------------- tax14_MAIZE agagttgatgagccctatttgttcta---------------------------------- 5890 5900 5910 5920 5930 5940 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gaagctgatgttatggccaaaaagtgaggtgatcctaccaaatgtactaaagtagctgaa tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ------------------------------------------------------------ tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 5950 5960 5970 5980 5990 6000 =========+=========+=========+=========+=========+=========+ tax1_SATIVA gcttcaatttgtcgctgtagaataagacctgctaggatttatctttcagcctgttttgtt tax2_SATIVA ------------------------------------------------------------ tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ------------------------------------------------------------ tax11_HORVU ------------------------------------------------------------ tax12_SORBI ------------------------------------------------------------ tax13_WHEAT ------------------------------------------------------------ tax14_MAIZE ------------------------------------------------------------ 6010 6020 6030 6040 6050 6060 =========+=========+=========+=========+=========+=========+ tax1_SATIVA agcctttctgccttctttgggtgagcagtattaaactaagttagtagacttttttctaag tax2_SATIVA ---------------------------atccgcggttaagccgtgttaaccctgtactat tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT ---------------------------gatccaa-------------------------- tax11_HORVU ---------------------------ctactag-------------------------- tax12_SORBI ---------------------------atcccaggtgatcgattaagcggtgttaacaca tax13_WHEAT ---------------------------atcctagattaag-------------------- tax14_MAIZE ---------------------------atcccagctggccaagtcg--tgtgttgacaca 6070 6080 6090 6100 6110 6120 =========+=========+=========+=========+=========+=========+ tax1_SATIVA tatgtcttgtatccttagacgggggtagcctcctaaagcttggacaaaccatgatttgac tax2_SATIVA tcatctgacttgcaaatgtggttgctcccactctggcaaataaagggtgctcagttaatt tax3_ORYNI ------------------------------------------------------------ tax4_ORYRU ------------------------------------------------------------ tax5_SORBI ------------------------------------------------------------ tax6_ORYME ------------------------------------------------------------ tax7_ORYGU ------------------------------------------------------------ tax8_ORYBA ------------------------------------------------------------ tax9_ORYLO ------------------------------------------------------------ tax10_WHEAT aattcaaacagctgtccaacattgctctcaaataaaaaaaaaaaaaaaaaaaaaaaaaaa tax11_HORVU ------------------------------------------------------------ tax12_SORBI ttattgtaccacta--cccctttgacatgcgattgatgtgaaggttaattgaaaacag-- tax13_WHEAT ----------------ctcccttattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-- tax14_MAIZE ----tgtaccactatttttctctgacatgaaattgtgaagtggagt--ttggaaacagtg 6130 6140 6150 =========+=========+=========+========= tax1_SATIVA catttgttaacctctaactggcctctgttacactaataa tax2_SATIVA tgtcgccagcaaga------------------------- tax3_ORYNI --------------------------------------- tax4_ORYRU --------------------------------------- tax5_SORBI --------------------------------------- tax6_ORYME --------------------------------------- tax7_ORYGU --------------------------------------- tax8_ORYBA --------------------------------------- tax9_ORYLO --------------------------------------- tax10_WHEAT aaaa----------------------------------- tax11_HORVU --------------------------------------- tax12_SORBI ---------tgctcctggaggttgagatggttttccaca tax13_WHEAT --------------------------------------- tax14_MAIZE gctagttcttgctcctgaaggctg---------------
Parameters used Minimum Number Of Sequences For A Conserved Position: 8 Minimum Number Of Sequences For A Flanking Position: 12 Maximum Number Of Contiguous Nonconserved Positions: 8 Minimum Length Of A Block: 10 Allowed Gap Positions: With Half Use Similarity Matrices: Yes
Flank positions of the 16 selected block(s) Flanks: [4740 4816] [4820 4835] [4839 4856] [4860 4894] [4913 4965] [4969 4987] [5003 5017] [5035 5047] [5051 5072] [5103 5128] [5163 5197] [5201 5223] [5241 5289] [5293 5366] [5370 5386] [5405 5447] New number of positions in /work/galaxy/database/files/009/dataset_9346.dat-gb: 535 (8% of the original 6159 positions)