Processed file: dataset_9346.dat
Number of sequences: 14
Alignment assumed to be: Protein
New number of positions: 535 (selected positions are underlined in blue)
10 20 30 40 50 60
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA agggtccaggaggacctcgc----------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU aacatattgttttacacggcgaatggcggaggagcctcgcgaaggagcgatggaggaaga
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
70 80 90 100 110 120
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cgacgatcctagcgacaggtatcgtactttcattcgttttcacttggactgaaaaatcct
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
130 140 150 160 170 180
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ccaacgacaattattctggaaaagagggagtagtttgaaaaactaaggaaacgtttgtcg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
190 200 210 220 230 240
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU attctttgtaggactagcattagcattgttggtatgcagtcgcggggtgctggggccgaa
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
250 260 270 280 290 300
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ggaacgaaacctcctccgtcaaaaggagtaaaaaaagcgcggtaaaaccagactcgaatc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
310 320 330 340 350 360
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cggcacccatagctcccggcgccaaccggagagctcgcagccgtggtgtaaaattgtggg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
370 380 390 400 410 420
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU catgcaaatgcacggttaccattaccagcaacagctgcatgtaattaagccgcggcaggg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
430 440 450 460 470 480
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gcaggacgcacgcacgcacgcacgcacggcccgcgtcagcttggagttggaccacagcag
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
490 500 510 520 530 540
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -----------cggcctttctgctttcgctttcacagtttcacggcttaccatttccttc
tax2_SATIVA --ccccctcctcctcctcgtcgcacgaccagaccagcagcaccaactccctttctgcctt
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cagcagctatctagtactccttcactcactcgctcgctcgctcgctgcctctctcgctcc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
550 560 570 580 590 600
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ccatctctccctcccgccacccccctctttctccccctccgtgtctcgcctttgcagaaa
tax2_SATIVA tcgctttcactgctcagtgctgctcctacacaccatttccccgtccgtccttcgcccccc
tax3_ORYNI -------tccctcccgccatccccctctttctccccctccgtgtctcgcctttgcagaaa
tax4_ORYRU -------tccctcccgccatccccctctttctccccctccgtgtctcgcctttgcagaaa
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gttctccgcccgctttcgctttcacggctccttaccgtttccccctcccctgggacggac
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ---ctttcactgctcaccatttcgcgtccttgcctcgccatctcgccgtcgcgggcgcct
610 620 630 640 650 660
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg
tax2_SATIVA gcgtctcttttccgcacccatctgctgcagctgcgcacctttaatttgcagaaagaaaga
tax3_ORYNI gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg
tax4_ORYRU gaaaggcgccacgaacccagcaacaacacccagcacaaaggcgaaacggggaaaaagagg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU agagcctcgctctccttttcacctcctcccctcgcctttggggcccgaacccaaccacag
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE gtttttcgcctccctccccccatctgccagactgccacgcacctttgcacaaagaaaggc
670 680 690 700 710 720
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca-
tax2_SATIVA aagaaagaaagaaaggaaagcaaggcccccccgagcgcaacagctagcccaacacacctc
tax3_ORYNI aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca-
tax4_ORYRU aggaaaacaacaagaggacgcgaggggtcggggtgggagagggaggctacactacagca-
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cagccatcgggggaaccgaggaggagaaaagagggcgagcgagcgagagagggagagata
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE gccccgaggtacagtacaggtagaggtagagccgacagccgagcgagcccgggagccgaa
730 740 750 760 770 780
=========+=========+=========+=========+=========+=========+
tax1_SATIVA --------------------------gcagcagaagcagagcgggagagtgatgagggag
tax2_SATIVA ctccatcaccaccgagaaggcaacgcatatcaaaagcgcgggcgcaaagcaaagataaca
tax3_ORYNI --------------------------gcagcagaagcagagcgggagagtgatgagggag
tax4_ORYRU --------------------------gcagcagaagcagagcgggagagtgatgagggag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT --------------------------------acagcagcggagacagagggagatacca
tax11_HORVU aaaggcgagggaagggaagggaagggaaggctacagcagcggagacagagggtgggagat
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT -----------------------accaccaaaaacgcacaaaagcagagggacatcagta
tax14_MAIZE cacctccaccagcagcaaaagcaccaccaccaccagaaccgagcgcacaaaagcgcgcgg
790 800 810 820 830 840
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tgagaccaggccagccaagc----------------------------------------
tax2_SATIVA tcagatcaggtcggcgcccc----------------------------------------
tax3_ORYNI tgagaccaggccagccaagc----------------------------------------
tax4_ORYRU tgagaccaggccagccaagc----------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ccagcac-------------caggccagccag----------------------------
tax11_HORVU accataccaccagcgggcagcgcgacagcgag----------------------------
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT tcaggtcggccgatcgagcgcgcgacgacgaacccctgccagtgctccct----------
tax14_MAIZE ccgggacgcgggagaaagcaacgggcagcctgtactgccggctgctgcagctaccctttc
850 860 870 880 890 900
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ----------------caggcccgggcgctcggaaagtgcg------------------g
tax2_SATIVA ----------------ccgctcccggctgccgcaaagcccacccgatcgatcgatcgacg
tax3_ORYNI ----------------caggcccgggcgctcggaaagtgcg------------------g
tax4_ORYRU ----------------caggcccgggcgctcggaaagtgcg------------------g
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ----------------ccaggcccggcgctcggaaagtgtggagctccttcgaaggcaga
tax11_HORVU ----------------ccaggcccggcgctcggaaagtgcggagc---------------
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ----------------cccggccaggcgctcgcaaagtgcgggagtcgttgccttctcga
tax14_MAIZE agtcccaattccagcccccggccaggcgctcgcaaagtgcgggagccgccctcttcgctc
910 920 930 940 950 960
=========+=========+=========+=========+=========+=========+
tax1_SATIVA agccgtttcccctctatctccactctctccagggccaggtgctc----------------
tax2_SATIVA cctcgttctcctcctcctccgaggctactctctgcagggcgctc----------------
tax3_ORYNI agccgtttcccctctatctccactctctccagggccaggtgctc----------------
tax4_ORYRU agccgtttcccctctatctccactctctccagggccaggtgctc----------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT aggcggtccccg------------------------------------------------
tax11_HORVU ---cgtttcccctccacctccactctctccag----------------------------
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT tctcctctcccgcttcctgtcctccatccctccctctctctcccccttactctctccagg
tax14_MAIZE gtgggctctctctctctctctccgcgttctcgctccaggtc-------------------
970 980 990 1000 1010 1020
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT -----------------------------------agcaggagcaggcggcgctggacgc
tax11_HORVU ------------------------------------------------------ggccag
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT gcgtctagctagctaaccgagctacgtcgcgcggcctccgaggctgggcgagctgagctg
tax14_MAIZE ----------------------------------------gtgtacgatccgccagtacg
1030 1040 1050 1060 1070 1080
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc
tax2_SATIVA ------gcttacgtctgcctctgcgtacgtgcaccgccca--------------------
tax3_ORYNI ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc
tax4_ORYRU ------actgcgctgcgcctcttcgcacgcaccacccgtactacgtgcccacccgcgcgc
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT caagcagccccagcccagccaggtgctcctgctcctcct-------gctctacctcgctg
tax11_HORVU cgaggccacccaccccagccaggtgctggtgctcctgctctacctcgctgcgctgcgctg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT agctgagcttacgtacgtacgcgcgcacgtacac--------------------------
tax14_MAIZE tacgggccccggcggcgctcgtgcgcgggcg-----------------------------
1090 1100 1110 1120 1130 1140
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg
tax2_SATIVA --------------------------------gcgcgggcgccatgtcgtccgccgc---
tax3_ORYNI gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg
tax4_ORYRU gcgccgaggagaagagacccacgaccgtacgtgcgtgcgcgccatgtcgtccgccgctgg
tax5_SORBI -------------------------------------------atgtcgtccgccgc---
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cccgccacccaccgcgtacgtacgtgcggtgcgggcgctcgccatgtcgtctcccgc---
tax11_HORVU cccgccacccacccaccgcctacgtac-gcgcgggcgctcgccatgtcgtctcccgc---
tax12_SORBI -------------------------------------------atgtcttcggcggc---
tax13_WHEAT ----------------------------ggccgcgccgccgccatgtcatcggccgc---
tax14_MAIZE --------------------------------------acaacatgtcctcggcggc---
1150 1160 1170 1180 1190 1200
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca
tax2_SATIVA ---ggggggaggaggagggtacgggggcggaggcggcg---------agcatcagcatca
tax3_ORYNI gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca
tax4_ORYRU gggcggcgggtacggcggcggccagggtggaggcgcgg---------agcaccaccacca
tax5_SORBI ---gggcgggtacggcggcggtgcggggagcggcgccg---------agccccactgcca
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------cggcgggtacggcggcgccg---------aggcccaccacca
tax11_HORVU ------------------cggcgggtacggcggcgccg---------aggcccaccacca
tax12_SORBI ---gggcggtggtggatacggggccggcggcggcgccg---------agcaccagcacc-
tax13_WHEAT ------------------tggcgggtacgggggcggcgccgagcaccagcatcagcatca
tax14_MAIZE ---------gggcggtggatacggggccggcggcgcgg---------agcatcagcacc-
1210 1220 1230 1240 1250 1260
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc
tax2_SATIVA gcagcagcagc---------accacctgctgcttgggcaggcggcgg-------------
tax3_ORYNI ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc
tax4_ORYRU ccaccacgggcacgccggtcacctcctgctccaccaccatccgcagcacgtggccggcgc
tax5_SORBI cggccacggccacggcg---acttcatgctgcaccaccatgcacagcatatcgccgccc-
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ccagcagcaccacggcc---acatgctgcttcataaccatgcacaccacatggcgaccgc
tax11_HORVU cggcc---------------acatgctgcttcacagccatgcacaccacatggcggccgc
tax12_SORBI --------------------------tgttgctggggcaggcggcgg-------------
tax13_WHEAT gcatcagcagcaccaccagcaccagctgctgctgggccaggc------cgcggcgg----
tax14_MAIZE --------------------------tgttgctggggcaggccgcgggcgcgg-------
1270 1280 1290 1300 1310 1320
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag
tax2_SATIVA --------------------------------ggcagctgtaccacgtgccgcagcacag
tax3_ORYNI ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag
tax4_ORYRU ggccgttgcggcagcggccgcggcggcgggcgggcagatgtaccacgtgccccagcacag
tax5_SORBI --------------------------------agcagctctaccacgtgccgcagcacag
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ggccgccgcggcgtcgggcg------------ggcagctctaccacgtgccgcagcacag
tax11_HORVU cgccgccgcgtcgggcg---------------ggcagctctaccacgtgccgcagcacag
tax12_SORBI --------------------------------ggcagctctaccacgtgccgcagcacag
tax13_WHEAT --------------------------------gccagctctaccacgtgccgcagcacag
tax14_MAIZE --------------------------------ggcagctctaccacgtgccgcagcacag
1330 1340 1350 1360 1370 1380
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca
tax2_SATIVA ccggcgggagaagctgcggttcccgcccgaccacccggcggag-----------------
tax3_ORYNI ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca
tax4_ORYRU ccggcgcgagaagctccggttcccgccggacgccggggactcgccaccgcctcatggtca
tax5_SORBI ccgtcgcgagaagctacggtttccgccggacgactcgccccca---------------ca
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ccggcgcgagaagctccggttcccgccggacgccgccgcggaggactcgccaccgacccc
tax11_HORVU ccgccgcgagaagctccggttcccgccggacgccgccgcggaggactcaccgccggcccc
tax12_SORBI ccgccgcgagaagctgcggttcccgcccgac-----------------------------
tax13_WHEAT ccgccgcgagaagctgcggttcccgccggac-----------------------------
tax14_MAIZE ccgccgcgagaagctgcggttcccgcccgacgac--------------------------
1390 1400 1410 1420 1430 1440
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc
tax2_SATIVA ----------------tcgccgccgccgccgccgcccgggtcgtg---------gccgct
tax3_ORYNI tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc
tax4_ORYRU tggtcatggtcatgccccgcagcagcagcagcagcacgggtcgtg---------gcctcc
tax5_SORBI cgcctccgcttccgccccgcagcagcagcacgccggggtggcctggccgcctccgccgcc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT tctcgcccaccaccaccagcagcagcaccagcagcaccaggccggggc------gtggcc
tax11_HORVU cctcgcc------------ccgcaccaccagcaccaccaggccggggc------gtggcc
tax12_SORBI ----------------ccggccgactcgcccccgcccactgcctg---------gccggc
tax13_WHEAT ----------------ccggcggactcctcctcgcccacgccgggcgcctggccgccgcc
tax14_MAIZE ----------------gcggccgactcgcccccgcccactgcctg---------gccggc
1450 1460 1470 1480 1490 1500
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag
tax2_SATIVA gcccccggcgttctactcctacgcgtcgtcct---cgtcatc---gtactcgccgcacag
tax3_ORYNI gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag
tax4_ORYRU gcccccggcgttctactcgtacgcgtcctcgt---cgtcgtc---gtactccccgcacag
tax5_SORBI gccgccggcgttctactcctacgcgtcctcctccacgtcgtc---ctactccccgcacag
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT gcccccggccttctactcctacgcgtcctcct---cctcctc---ctactcgccgcacag
tax11_HORVU gcccccggccttctactcctacgcgtcctcct---cctcctc---ctactcaccgcacag
tax12_SORBI gcccccacccttctactcctacgcgtcctcgtcgacgtcgtc---ctactcgccgcatag
tax13_WHEAT cacggtgcccttctactcctacgcgtcctcct---cctcctc---ctactcgccgcacag
tax14_MAIZE gcccccacccttctactcctacgcttcctcgtcgacatcgtcctactactcgccgcatag
1510 1520 1530 1540 1550 1560
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc
tax2_SATIVA cccga---cgctggcgcacgcgcagttggtggcg---------catgggatgccgccggg
tax3_ORYNI cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc
tax4_ORYRU cccta---ctctagcgcaggcgcagctggtggcg---------cacgggctggcgccgcc
tax5_SORBI cccca---cgctggcgcaggcgcagctcgtcgtggcgcacggcctcgccccgccgccgct
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cccga---cggtgccgcagggccagcagctggtgctcaacgggctcaccgcccagcaggt
tax11_HORVU cccca---cggtgccgcagggccagcagctggtgctcaacgggctcaccgcccagcaggt
tax12_SORBI cccaacgccgctggcgcacgcgcagctcgtggcg---------cacgcgctacctgcagg
tax13_WHEAT cccca---cgctggcgcacgccca---------------------caaccagctcctggt
tax14_MAIZE cccca---cgctggcgcacgcgcagctagtagca---------cacgcgctacctgcggg
1570 1580 1590 1600 1610 1620
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc
tax2_SATIVA ggccgcgacgagcggaggggcccagatcccgagccagaacttcgcgctgtcgctgtcgtc
tax3_ORYNI gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc
tax4_ORYRU gctcccg---------------cagatcccgacgcagaacttctcgctgtcgctctcctc
tax5_SORBI ctcgtcg---------------cagatcccgacgcagaacttcgcgctctcgctctcgtc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT caccgcg---cagcagttcccgcagatccccacgcagaacttctcgctctccctctcctc
tax11_HORVU caccgcg---cagcagttcccgcacatccccacgcacaacttctcgctctccctctcctc
tax12_SORBI cgccggg------------gcccagatcccgagccagaacttcgcgctctcgctctcctc
tax13_WHEAT ccacgggatgccggcaggagcccagatcccgagccagaacttcgcgctctcgctgtcctc
tax14_MAIZE cgccggg------------gtccagatcccgagccagaacttcgcgctctcgctctcttc
1630 1640 1650 1660 1670 1680
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg
tax2_SATIVA ggcgtcctcgaaccct------ccgcccacgccgaggaggcagtttggcggcggcggcgg
tax3_ORYNI cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg
tax4_ORYRU cgcgtcgtcgaatcct------ccaccaccgcaggcgcagccgaggaggcagctcggcgg
tax5_SORBI ctcgtcctcgaaccca------ccgcccgcgccgcccccgcagcagaggagg------gc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cgcctcgtccaaccccgccaccacgcccccggcgcccaggaagca---ggagccaggagc
tax11_HORVU cgcctcgtccaatcccgccacggcgcccccgacgcccaggaagcagcaggagccgggagg
tax12_SORBI ggcgtcctcgaaccct------ccgcccgcgccgcggaggcagct------------cgc
tax13_WHEAT gtcctcctcgaaccct------ccgcctcagcagcggaggca------------------
tax14_MAIZE ggcgccctcgaaccct------ccgcccgcgccgcggaggcagct------------cgc
1690 1700 1710 1720 1730 1740
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg
tax2_SATIVA cggcggcggggccgccgggccgtacgggcccttcacgggctacgccgccgtgctcgggcg
tax3_ORYNI cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg
tax4_ORYRU cctcgcgcaggccacggggccgttcggtcccttcaccggctacgccgccgtgctcggccg
tax5_SORBI gcacgccgcgccctcggcgcccttcgggcccttcactggctacgcggccgtgctcgggcg
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cgccgcgccggccgcgtggccgtacgggcccttcaccggctacgccacggtgctcgggcg
tax11_HORVU cgccg------------ggccgtgcggtcccttcaccggctacgcctcggtgctcgggcg
tax12_SORBI cgcgggggtagccacggggccgtacggcccgttcacgggctacgcggccgtcctcggccg
tax13_WHEAT cctcgccggtgccaccgggccgtacgggcccttcacgggctacgcagccgtgctcgggcg
tax14_MAIZE cgcgggggtagccacggggccgtacggcccgttcacgggctacgcggccgtcctcgggcg
1750 1760 1770 1780 1790 1800
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc
tax2_SATIVA gtccaggttcttgggccccgcgcagaagctgctcgaggagatctgcgacgtcggcggccg
tax3_ORYNI gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc
tax4_ORYRU gtcccgtttcctcggcccggcagagaagctgttcgaggagatctgcgacgtcggcggcgc
tax5_SORBI ctcccgtttcctcggccctgcggagaagctgctcgaggagatctgcgatgtcgggggcgc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT atccaggttcctcggcccggcgcagaagctgctcgaggagatctgcgacgtggggggcgc
tax11_HORVU atccaagttcctcgtcccggcgcagaggcttctggaggagatctgcgacgtgggaggcgc
tax12_SORBI gtccaggttcctcggccccgcgcagaagctgctcgaggagatctgcgacgtgggcggacg
tax13_WHEAT ctctaggttcctgggccccgcgcagaagctgctggaggagatctgcgacgtcggcggccg
tax14_MAIZE gtccaggttcctgggccccgcgcagaagctgctcgaagagatctgtaacgtcggcggacg
1810 1820 1830 1840 1850 1860
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga
tax2_SATIVA ccccgcgcagcttgacagggg---ctccgacgagggtttgctcgacgtagacgccatgga
tax3_ORYNI tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga
tax4_ORYRU tgcttcgcacgtcgaccgcaccatctccgacgagggcctgctcgacgcggatccgatgga
tax5_SORBI cgcctcgcacgtggaccggagcgtctccgacgagggcgtgctcgacgctgatccgatg--
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ggccgcgcacgccgacaccagcgtcccggacgagggcccgctcgacgcggacgccatgga
tax11_HORVU ggccgcgcacgccgaccgcagcctcccggacgagggcctgctcgacgcggacacgatg--
tax12_SORBI gcccccgcacctggaccggcg---ctccgacgagggcatgctcgacatggacgccatgga
tax13_WHEAT gccctcgcagctggaccgctg---ctccgacgacgggttgctcgacttggatgccatgga
tax14_MAIZE gcccccgcacctggaccctct---ctccgacgagggtatgttcggcatgga---------
1870 1880 1890 1900 1910 1920
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga
tax2_SATIVA cgccgcg------ggaagcgtcgaccacgagatggacggcagcgatcgcgccgtcgcgga
tax3_ORYNI cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga
tax4_ORYRU cggcgtcgatcatgacgtcgttgatcacgacctcggcggcgctgaccgcgcagcggccga
tax5_SORBI -------------gaagccatcgatcacgacatggacggcgccgaccgcgccgcctcgga
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cggcgccgac---gacgcggccggccacgagctggacacctccggcc-------------
tax11_HORVU -------------gacgtcgccgacgacgagctggacgccgcaggcc-------------
tax12_SORBI cgtggtt------ggggacgtggaccatgacatggacggcggtgaccgcgctaccgctga
tax13_WHEAT cgccgcg------ggcgacgtcggccacgagatggacagcagcgaccgcgctgccgctga
tax14_MAIZE ------------------------gcatggcatgggcggcgttgaccgcgctaccgctga
1930 1940 1950 1960 1970 1980
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat
tax2_SATIVA cgcggtcacggtctccggcgccgagcagcagtggaggaagactaggctcatctcgcttat
tax3_ORYNI cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat
tax4_ORYRU cgctggccccatctcgggggccgagcagcagtggaagaagacgaagctcatctccatgat
tax5_SORBI cgctgggccaatctccggcgccgagcagcagtggaagaagactaggcttatctccatgat
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT --------ccatgtccggcgccgagcagcagtggaagaagacgaggctcatctccatgat
tax11_HORVU --------ccatgtacggcgccgagcagcagtggaagaagacgaggctcatctccatgat
tax12_SORBI ggcggtcgctgtctccggcgccgagcagcagtggaggaagaccaggctcatctccctcat
tax13_WHEAT gggcgtcacggtctccggcgccgagcaacagtggaggaagactaggctcatctccctcat
tax14_MAIZE ggcggtcgctgtctccggcgccgagcagcagtggaggaagaccaggctcatctccctcat
1990 2000 2010 2020 2030 2040
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ggaag-------------------------------------------------------
tax2_SATIVA ggaag-------------------------------------------------------
tax3_ORYNI ggaagaggtgagtgagctccgctagccgcctcaattcctccttccaggtttcttgtggcg
tax4_ORYRU ggaagaggtgagtgagctccgctagccgcctcaattcctccttccaggtttcttgtggcg
tax5_SORBI ggaag-------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ggaag-------------------------------------------------------
tax11_HORVU ggaagaggtgagctagggtaccacgtccaaatttctactctacctcgtttgcttcgatgc
tax12_SORBI ggagg-------------------------------------------------------
tax13_WHEAT ggaag-------------------------------------------------------
tax14_MAIZE ggagg-------------------------------------------------------
2050 2060 2070 2080 2090 2100
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI accatctttttcaccttgtttcggcgttacaattatcgctactcctgggtggagaagaat
tax4_ORYRU accatctttttcaccttgtttcggcgttacaattatcgctactcctgggtggagaagaat
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tgccgcgctgggactgggagcgccaagaatcttgcacatagcggtcacatcaccatggct
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2110 2120 2130 2140 2150 2160
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI cttgcacatagtggtcatgtcaccgatgcagttgcggattgcttttatttactgtggttg
tax4_ORYRU cttgcacatagtggtcatgtcaccgatgcagttgcggattgcttttatttactgtggttg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ttgcttgcttttattcactgtgcttccgcggttgcatgtgcttttgatttgatgatcatt
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2170 2180 2190 2200 2210 2220
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI catgtgcttttgatttgatgatgatttcctttgctgctgatacatcttttgatttgttct
tax4_ORYRU catgtgcttttgatttgatgatgatttcctttgctgctgatacatcttttgatttgttct
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tccatggctgctgttacattacatttgttcggattttccttttctcctttggccacagtg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2230 2240 2250 2260 2270 2280
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ctctcttctttttcctcgagtggtttgagcttgtacagttctgcactgttcatgatgaat
tax4_ORYRU ctctcttctttttcctcgagtggtttgagcttgtacagttctgcactgttcatgatgaat
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ccgcactgctcacccccaacaatttgctgctttccttgctccttttttcctcgccaaaga
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2290 2300 2310 2320 2330 2340
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI agtggtgttcctccgcgtcttatcaccaaagattgtattttgatcggctgtttagcacta
tax4_ORYRU agtggtgttcctccgcgtcttatcaccaaagattgtattttgatcggctgtttagcacta
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ttggatgttgattagtttcgccgcactaagcacaccttttccgaatgccatctacatgaa
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2350 2360 2370 2380 2390 2400
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ctgtgagtgcttgaaaagatagtcctccacatgaaattagaactaaccgtcctttcaaag
tax4_ORYRU ctgtgagtgcttgaaaagatagtcctccacatgaaattagaactaaccgtcctttcaaag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tgaaaacacaatcgattattgtcctcgaacgctttggggcgataggtgatgctggaaacc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2410 2420 2430 2440 2450 2460
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tcttgagacatgacccatgggcgatgccagatgccattaattctctcttgttggtgtcct
tax4_ORYRU tcttgagacatgacccatgggcgatgccagatgccattaattctctcttgttggtgtcct
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU agcaaaactttcgccggtcatgtcaagaaaaatcaagttctttcatcttccacatggtta
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2470 2480 2490 2500 2510 2520
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ctggtgagaatagtggcgctgctaaaagcttcgagctttgaaatgcgctctcctctacga
tax4_ORYRU ctggtgagaatagtggcgctgctaaaagcttcgagctttgaaatgcgctctcctctacga
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU taaggatcggaggacttgaccctctcgcagcgtcctcttccaacctctgaggcaatacta
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2530 2540 2550 2560 2570 2580
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tgtcggagcatggcaattaggagtatactacatgagaatctacgtaggagtacaatgtag
tax4_ORYRU tgtcggagcatggcaattaggagtatactacatgagaatctacgtaggagtacaatgtag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU catgggatgggaatctacgtacgatgtagtagaaagcttccatttatggagctcccagtc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2590 2600 2610 2620 2630 2640
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI aaagcttctatttttggaaccctctgtaaggcaattttgtttgcctgtgttcttcaatag
tax4_ORYRU aaagcttctatttttggaaccctctgtaaggcaattttgtttgcctgtgttcttcaatag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ttacagtagcaggcgagcttgctggtctgacctctttattaatggcgtcttacttctata
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2650 2660 2670 2680 2690 2700
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI catctctctcccataattgggagctacgcttgctttgttcgtgtcatatccacatgaaaa
tax4_ORYRU catctctctcccataattgggagctacgcttgctttgttcgtgtcatatccacatgaaaa
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gttgggaagtaggctttggctcgttgatgtcacatccacatgaaagctaaagctcgttga
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2710 2720 2730 2740 2750 2760
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI caaaagcacactgcttccttttcctaacatggatatctttttatctaatcattctttgtt
tax4_ORYRU caaaagcacactgcttccttttcctaacatggatatctttttatctaatcattctttgtt
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tgccgtttatctcttactcctactaatccggctgcaattaatcacctctctcatcgt---
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
2770 2780 2790 2800 2810 2820
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -------------------------------------------------aggtttgcaag
tax2_SATIVA -------------------------------------------------acgtttgcaag
tax3_ORYNI ggtagattatctctcatcgaattctaacccaacagcaatatctttttttaggtttgcaag
tax4_ORYRU ggtagattatctctcatcgaattctaacccaacagcaatatctttttttaggtttgcaag
tax5_SORBI -------------------------------------------------aggtttgcaag
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT -------------------------------------------------aggtgtgcaag
tax11_HORVU -------------------------------------------------aggtgtgcaag
tax12_SORBI -------------------------------------------------acgtttgcagg
tax13_WHEAT -------------------------------------------------aagtttgcaag
tax14_MAIZE -------------------------------------------------acgtttgcagg
2830 2840 2850 2860 2870 2880
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc
tax2_SATIVA cgatacaggcaatactaccagcaactccaagctgtagtatcgtcctttgagactgttgcg
tax3_ORYNI aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc
tax4_ORYRU aggtaccggcagtactaccagcaggttcaggctgtgatggcctcgttcgagaccgtcgcc
tax5_SORBI aggtaccggctgtactaccagcaggtccagacagtgatcaactcgttcgagaccgtggcc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT aggtaccggcagtactaccagcaggtccaggccgtgatcgcgtcgttcgagagcgtggct
tax11_HORVU aggtaccggcagtactaccagcaggtccaatccgcgatcgcctcgttcgagacggtcgcc
tax12_SORBI cgatacaagcagtactaccagcagctgcaatctgtgatctcctcgtttgagactgttgcg
tax13_WHEAT cgatacaggcaatactaccagcagctccaagctgtgatctcctcgtttgaaaccgtcgcc
tax14_MAIZE cgatacaaacaatactaccagcagctgcaatctgtgatctcctcgtttgagacggtttcg
2890 2900 2910 2920 2930 2940
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc
tax2_SATIVA ggtctgagcaatgctgctccttttgcttccatggctcttaggacaatgtcgaagcatttc
tax3_ORYNI gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc
tax4_ORYRU gggttcagcaacgccgcgccgttcgcggcattggcgctgagggcgatggcgaagcacttc
tax5_SORBI gggttcagcaacgctgccccattcgcggcgatggcgctgagagccatggcgaagcacttc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT gggttcagcaacgccgccccgttcacggcgctggcgctgagggtgatggccaggcacttc
tax11_HORVU gggttcagcaacgccgccccgttcacggcgctggccctgagggtgatggccaagcacttc
tax12_SORBI gggctgagcaacgccgccccctttgcttccatggctcttcggacaatgtcgaagcatttc
tax13_WHEAT gggctgagcaacgccgccccctttgcctccatcgctctccggacgatgtcgaagcatttc
tax14_MAIZE gggctgagcaacgccgtcccctttgcttccatggctcttcggacaatgtctaagcatttc
2950 2960 2970 2980 2990 3000
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg
tax2_SATIVA aagtatttgaagggcattatactgaaccagctgcgcaatacgggcaagggtgctac---a
tax3_ORYNI aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg
tax4_ORYRU aagtgcttgaagagcatgattctgaaccagctgcgcaacacgagcaacaaggtcgctgtg
tax5_SORBI aagtgcctgaagagcatgatactgagccagctgcgcaacac---caaggtcgctgccggc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT aggtgcatcaagggcatgatactcagccagctgcgcaacaccagcaagatgccggtcaag
tax11_HORVU aagaccatcaaggagatgatactgagccagctgcgcaacaccagcaagatgccggtcaag
tax12_SORBI aagtgtctcaaggaaatgataatgagccaattaaggaacacaagcaaggttgtcgccaat
tax13_WHEAT aagtacctaaagagcaccatacagagccagctgcgcaacaccagcaaggtggccgccggg
tax14_MAIZE aagttcctgaaggggatgataatgagccaattacggaacacaagcaaggtcgctgccagt
3010 3020 3030 3040 3050 3060
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc
tax2_SATIVA aaagatggtctcggcaaggaagacacaacaaactttgggct---------tatgggcggc
tax3_ORYNI aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc
tax4_ORYRU aaggacgggctaaacaaggagatcgccgtg---ttcgggctcgccgggggtagcagcggc
tax5_SORBI aaggaggggctcagcaaggacatcgtcatg---ttcgggctcgc------tggcggcagc
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ga---aggcatgagcaaggacatcaccatc---ttcggcctcgg------cggcggcggc
tax11_HORVU gggtcgtccatgagcaaggacatcaccatc---ttcggcct---------cggcggcggc
tax12_SORBI ga---tggtattggcaaagacgatatggctaactttgcgct---------tatgggtggt
tax13_WHEAT aaagacagcctcggcaaggaagacatggccaacttcgggct---------catgggcggc
tax14_MAIZE ga---tggtattggcaaggatgatatggcgaactttgcgct---------tatgggtggt
3070 3080 3090 3100 3110 3120
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac
tax2_SATIVA ggcgc---------tggcctactaaggggaaacaatgtgaattcgtttagccaacctcac
tax3_ORYNI ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac
tax4_ORYRU ggcgc---------cggcctccagcgagcgaacagcgcgagcgcgttcggccagccgcac
tax5_SORBI gcggc---------tgccctccagagagctagcagcatggccgccttcggccagccgcac
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ggcgcccccgtcggcggcttccagaggggtggcagcgtgaacggcttcggccagccgcac
tax11_HORVU ggcgcccccgtcggcggcttccagagagggagcagcgtgaacggcttcggccagccgcac
tax12_SORBI ggagc---------aggcctcctgaggggaaacaatgtgaacgcattcggccagcctcac
tax13_WHEAT agcgc---------cgccctcatgaggggaggcaacgcgaacgcgttcagccagccccac
tax14_MAIZE ggagc---------agaccacctgaggggaaacagcgtgaacacgttcagccaggctcac
3130 3140 3150 3160 3170 3180
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttttacgcgcgtgg
tax2_SATIVA aacatatggcgcccgcaaagagggctaccagagcgtgctgtttcggttcttcgtgcatgg
tax3_ORYNI aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttctacgcgcgtgg
tax4_ORYRU aatatttggcgcccacagagggggctccccgagcgcgctgtgtccgttctacgcgcgtgg
tax5_SORBI aacatctggcggccacagagagggctgccggagcgcgcagtgtctgtcctccgcgcttgg
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT aacatctggcgcccccagaggggcctccccgagcgctccgtcacggtcctccgggcttgg
tax11_HORVU aacatctggcgcccccagaggggcctccccgagcgctccgtcaccgtcctccgggcttgg
tax12_SORBI aacatttggaggcctcaaagagggcttcctgagcgtgcagtgtctgtgcttcgctcgtgg
tax13_WHEAT aacatttggcggccacagaggggactcccagagcgcgcagtgtcggttcttcgcgcctgg
tax14_MAIZE aacatttggaggcctcaaagagggcttcctgagcgtgcagtgtctgttcttcgctcatgg
3190 3200 3210 3220 3230 3240
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ctgttcgaacacttcctgcaccc-------------------------------------
tax2_SATIVA ctattcgaacacttcctgcaccc-------------------------------------
tax3_ORYNI ctgttcgaacacttcctgcacccgtaagccctttgatcttcttattgctttatggttaac
tax4_ORYRU ctgttcgaacacttcctgcacccgtaagccctttgatcttcttattgctttatggttaac
tax5_SORBI ctcttcgaacacttcctgcaccc-------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ctcttcgagcacttcctgcaccc-------------------------------------
tax11_HORVU ctcttcgagcacttcctgcacccgtaagtttctttcttatccaatccactcaactaatta
tax12_SORBI ctgttcgagcacttcttacatcc-------------------------------------
tax13_WHEAT ctgttcgagcacttcttgcatcc-------------------------------------
tax14_MAIZE ctgttcgagcacttcctacatcc-------------------------------------
3250 3260 3270 3280 3290 3300
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tctgggttcattagctgcacgcattccaagacaatgatgatgatgctacagttgcttgct
tax4_ORYRU tctgggttcattagctgcacgcattccaagacaatgatgatgatgctacagttgcttgct
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ctgctagctcatggtaattagcattactgcttcactagacgacgtacgtactccgcgcct
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3310 3320 3330 3340 3350 3360
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ttagatgaggataacagtagtccctaagcatttgtggtgagtgtggttgttcctttttga
tax4_ORYRU ttagatgaggataacagtagtccctaagcatttgtggtgagtgtggttgttcctttttga
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ttagaagataataatgcttctatgcatgatggtgccacatccacatgattatgctgggcc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3370 3380 3390 3400 3410 3420
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tatgatcagtagtacgtgacactggaaccgtggggttgatccgttgatggtttggtgata
tax4_ORYRU tatgatcagtagtacgtgacactggaaccgtggggttgatccgttgatggtttggtgata
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tggacctgcggttgttttagctgattgcaagcaatcctcggtgtcgaaatcattaggatg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3430 3440 3450 3460 3470 3480
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI gcaagcgaccctgcctgtctgatagaaggctatggcctcatgcaggcatggcttccaatc
tax4_ORYRU gcaagcgaccctgcctgtctgatagaaggctatggcctcatgcaggcatggcttccaatc
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gatggatggccgagcatgcatgatcgagtgtcatggcatggcttagcttggcttggcttg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3490 3500 3510 3520 3530 3540
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI catcattaacataacttttaaacctgtacctaactgtgtgttgagctgtactactagaga
tax4_ORYRU catcattaacataacttttaaacctgtacctaactgtgtgttgagctgtactactagaga
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gcttggcatccaaatcattctattggagctaataagatggcaagccacagctttttaagg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3550 3560 3570 3580 3590 3600
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tcatactttcgacttggtgatctaaatagtggcattcctgctgcttgtttgatgcattct
tax4_ORYRU tcatactttcgacttggtgatctaaatagtggcattcctgctgcttgtttgatgcattct
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ctttgttcattttgagctgtgcacatcatcaatccatttgctaacagtctaggtcctccg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3610 3620 3630 3640 3650 3660
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI t-----------------------------------------------------------
tax4_ORYRU t-----------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ttgcatcttttcttagatcctgacatttacatgactttccaactatcattaggtgagcgg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3670 3680 3690 3700 3710 3720
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ctttaaggatttggttagggcgtcctaattatacttatgtgcttgcttattttgtcatgc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3730 3740 3750 3760 3770 3780
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU actgactgagaaacaacttgcgagtaagcttacttctaatgcagttttagggggcaccca
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3790 3800 3810 3820 3830 3840
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cctgtaggaagatgaaacatcatcattgttttggttgttttgcatactacatcttgtagt
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3850 3860 3870 3880 3890 3900
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------aatcacgtattaacttcctggatttgttgtttctgg
tax4_ORYRU ------------------------aatcacgtattaacttcctggatttgttgtttctgg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU acaatcgttttttccatgatgtaagacctggtggttacatctggttgattggtataatgt
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3910 3920 3930 3940 3950 3960
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ctgtaatgtatgaatgtggtggcccggcttctcataagtagagtggcttttagaacacgt
tax4_ORYRU ctgtaatgtatgaatgtggtggcccggcttctcagaagtagagtggcttttagaacacgt
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tagcatattcagttgttgttaattataactttataatgctagagcctttccatctccaac
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
3970 3980 3990 4000 4010 4020
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI taatgctggaattaacttgccagatgggcattacttcgaactaaatcttagaagtacata
tax4_ORYRU taatgctggaattaacttgccagatgggcattacttcgaactaaatcttagaagtacata
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tggatttggtattatattctgtaccctttattcattattgctgccaatatttcaaagctc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4030 4040 4050 4060 4070 4080
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ccttaggctataataagcatcatcataatgtagtttgtttggcatattctttttagtttt
tax4_ORYRU ccttaggctataataagcatcatcataatgtagtttgtttggcatattctttttagtttt
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tagaaagaaaagactgataattgtcgattcatgtccttttgttagatcacacatccacca
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4090 4100 4110 4120 4130 4140
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tgtagtatgatcattttgcattatatatatgatctaaaggctgtagctaagccctactgg
tax4_ORYRU tgtagtatgatcattttgcattatatatatgatctaaaggctgtagctaagccctactgg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU attcctggatttaattaacttgccctttgcaaaagaaaagggcctacttggatggtgcta
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4150 4160 4170 4180 4190 4200
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tggttacatcaagttgattgacatgtgctcgagatattcagtttgagataattagtacag
tax4_ORYRU tggttacatcaagttgattgacatgtgctcgagatattcagtttgagataattagtacag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU gactgataagagaaattctttaagatcgaacctttatttttgagatgttgcttggagtta
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4210 4220 4230 4240 4250 4260
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tagtttagtgctagccattttcatccagtaaggggtttgtctgtctgtttattactttaa
tax4_ORYRU tagtttagtgctagccattttcatccagtaaggggtttgtctgtctgtttattactttaa
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tgtatgttcagaccgaataaacaaaccatgacaggcaccagcacaataattttctttgtt
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4270 4280 4290 4300 4310 4320
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI aaaaaggatcagtcatcatctttaaaaaaaagtcactgaaatccattatttgtcagatgt
tax4_ORYRU aaaaaggatcagtcatcatctttaaaaaaaagtcactgaaatccattatttgtcagatgt
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU cccctcatctaacactaacctggcttgttttctagtacaccttttctattcactctgggc
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4330 4340 4350 4360 4370 4380
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tggtcctagtgttattagttcccgtattgatcaaatcctttgtaagcttcgacttggaag
tax4_ORYRU tggtcctagtgttattagttcccgtattgatcaaatcctttgtaagcttcgacttggaag
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU attcaaatataattgttagatccccacaatcggtgcttagatttaacttgctcttaaaaa
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4390 4400 4410 4420 4430 4440
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI atgtgtttgcctacatctttgcttggatattcgccatgtaaaatatttgttgtgatcctg
tax4_ORYRU atgtgtttgcctacatctttgcttggatattcgccatgtaaaatatttgttgtgatcctg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU aggtcttcttggatggcgctagactgataagagaaattctctaagatcaaaaactttgtt
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4450 4460 4470 4480 4490 4500
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI taaaccatcgttaagcatgcacatcacaagtgtcttttgtaatagcggaaatttcttgat
tax4_ORYRU taaaccatcgttaagcatgcacatcacaagtgtcttttgtaatagcggaaatttcttgat
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU tctagggcggagttatttgcaatgttaaagactgaataaaaagctatgacaggcacctca
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4510 4520 4530 4540 4550 4560
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ------------------------------------------------------------
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI tatttgattttgcgctatatctggtactttgttctttgcatcagtgacattttcagattc
tax4_ORYRU tatttgattttgcgctatatctggtactttgttctttgcatcagtgacattttcagattc
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ccctaacctggctttgttttgcactcattttctactggcattcgtctgatatttgggttg
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
4570 4580 4590 4600 4610 4620
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -----------gtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg
tax2_SATIVA -----------gtatccaactgacagcgataagcagatgcttgctaaacagacaggatta
tax3_ORYNI caatcgtgcaggtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg
tax4_ORYRU caatcgtgcaggtatcctaccgatggtgataagcaaatgctagcaaaacaaacaggcttg
tax5_SORBI -----------atatcctactgatggagacaagcaaatgcttgctaaacagacgggttta
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT -----------gtatcctaccgatggcgacaagcaaatgctggccaagcagactggccta
tax11_HORVU aaaccttgcaggtatcctaccgatggcgacaagcaaatgctggccaagcaaactggttta
tax12_SORBI -----------gtatccaactgatagtgacaagcagatgctggctaaacagacaggctta
tax13_WHEAT -----------gtacccaactgatagcgacaagcaaatgttggctaaacaaacaggctta
tax14_MAIZE -----------gtacccaactgatagtgacaagcagatgctggctaaacagacaggccta
4630 4640 4650 4660 4670 4680
=========+=========+=========+=========+=========+=========+
tax1_SATIVA acacgcaaccag------------------------------------------------
tax2_SATIVA actaggaaccag------------------------------------------------
tax3_ORYNI acacgcaaccaggtaaatagaaatgcttctaggtgtgttcaagaatagattgcacagtat
tax4_ORYRU acacgcaaccaggtaaatagaaatgcttctaggtgtgttcaagaatagattgcacagtat
tax5_SORBI acacggaaccag------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT acaaggaatcag------------------------------------------------
tax11_HORVU acaaggaatcaggtaagcagcaactaaagctggggactgttagcactagcatgtcatttt
tax12_SORBI acaaggaaccag------------------------------------------------
tax13_WHEAT acgaggaatcag------------------------------------------------
tax14_MAIZE actaggaaccag------------------------------------------------
4690 4700 4710 4720 4730 4740
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -----------------------------------------------------------g
tax2_SATIVA -----------------------------------------------------------g
tax3_ORYNI atcaggctagattgttttgtttacaggacattttgattgaatttgtgatgctggtgcagg
tax4_ORYRU atcaggctagattgttttgttttcaggacattttgattgaatttgtgatgctggtgcagg
tax5_SORBI -----------------------------------------------------------g
tax6_ORYME -----------------------------------------------------------g
tax7_ORYGU -----------------------------------------------------------g
tax8_ORYBA -----------------------------------------------------------g
tax9_ORYLO -----------------------------------------------------------g
tax10_WHEAT -----------------------------------------------------------g
tax11_HORVU gtttctggaacttactgtagttgacatgttggtgggttaatgggtgtcgtgcag-----g
tax12_SORBI -----------------------------------------------------------g
tax13_WHEAT -----------------------------------------------------------g
tax14_MAIZE -----------------------------------------------------------g
#
4750 4760 4770 4780 4790 4800
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc
tax2_SATIVA tatcgaactggtttatcaatgcaagggttaggctctggaagccaatggttgaagaaattc
tax3_ORYNI tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc
tax4_ORYRU tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc
tax5_SORBI tatcaaactggtttattaatgcaagggttcgtctttggaagccaatggtggaggaaatcc
tax6_ORYME tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc
tax7_ORYGU tatcgaactggtttatcaacgcaagggttaggttgtggaagccaatggtggaagaaattc
tax8_ORYBA tatcgaactggtttatcaacgcgagggttaggttgtggaagccaatggtggaagaaattc
tax9_ORYLO tatcgaactggtttatcaacgcaagggtcaggttgtggaagccaatggtggaagaaattc
tax10_WHEAT tgtcgaactggttcatcaacgcgagggtgcggctctggaagccaatggtggaggagatcc
tax11_HORVU tgtcgaactggttcatcaacgcgagggtgaggctctggaagccaatggtggaggagatcc
tax12_SORBI tgtcaaattggtttatcaatgcaagggtgcggctctggaagcccatggtggaagaaatcc
tax13_WHEAT tctcaaactggttcatcaacgcaagggttagactctggaagccaatggtggaagaaatcc
tax14_MAIZE tgtcaaactggtttatcaacgcaagggtgcggctctggaagcccatggtggaagagatcc
############################################################
4810 4820 4830 4840 4850 4860
=========+=========+=========+=========+=========+=========+
tax1_SATIVA acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax2_SATIVA acaacctcgagatgag---gcagctgcagaagaat---ccgtctcttgacaagaat---c
tax3_ORYNI acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax4_ORYRU acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax5_SORBI acaacctcgagatgag---gcaggtgcacaaacac---cctgttctcgacaaggga---c
tax6_ORYME acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax7_ORYGU acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax8_ORYBA acaacctagagatgag---gcaaatgcacaagcac---tcggtggttgacaagggc---c
tax9_ORYLO acaacctagagatgag---gcaaatgcacaagcac---tcagtggttgacaagggt---c
tax10_WHEAT acaacctggagatgag---gcaggtccacaagcac---tcgccgcacgacaagggccagc
tax11_HORVU acaacctggagatgag---gcaggtgcacaagcag---tcaccgcacgacaatggcagcc
tax12_SORBI acaacctggagatgcg---gcaggtgcagaagaac---acatcggtggacaagaat---c
tax13_WHEAT acaacctggagatgcg---gcaggggcataagagc---tcggccgccgacaagaat---c
tax14_MAIZE acaacctggagatgcggcagcagctgcagaagaacacgtcggcggtggacaagacc---c
################ ################ ################## #
4870 4880 4890 4900 4910 4920
=========+=========+=========+=========+=========+=========+
tax1_SATIVA agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax2_SATIVA agctctccatgcagca-c--acccaacattcgtc------------------ggacagca
tax3_ORYNI agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax4_ORYRU agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax5_SORBI agcacgtgttgcatcaccaaacccagcattcgtc------------------tgagagca
tax6_ORYME agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax7_ORYGU agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax8_ORYBA agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax9_ORYLO agcatagcgtgcatcatcaggcccagcattcttc------------------gcagtgca
tax10_WHEAT agaacggcgtccacggccaggctcaccaacactcgtcgcagcagcagcagcagcagcgca
tax11_HORVU agcacggcgtccacggccatgctcaccagccatcgtcacagcagcagcagcagcagcgca
tax12_SORBI aacttggcatgcagca---gattcagcactcgac------------------ggacagca
tax13_WHEAT agctcggcgtgcagcagcaaacccagcagcattcgcc---------------ggacagca
tax14_MAIZE aactcggcatgcagcagctgatccagcactcgtc--------------------------
################################## ########
4930 4940 4950 4960 4970 4980
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataactc
tax2_SATIVA gcgggaagccctgtgatccatcaaactcgctgcaagggcaaagta---gcagcatgacca
tax3_ORYNI gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc
tax4_ORYRU gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc
tax5_SORBI gtggaaaaccctctgatccttccgactctcatctcggccaaagca---gcagcctcacta
tax6_ORYME gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataactc
tax7_ORYGU gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc
tax8_ORYBA gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc
tax9_ORYLO gcgggaatccctccgttccttcggactcccatcctggacagagca---gcagcataaccc
tax10_WHEAT gcggcaagcgctccgagccctgcgactcgcaccccggccagagca---gcggcgtcacca
tax11_HORVU gcggcaagcgctccgagccctgcgactcgcacctcggccagtgca---gcggcgtcacca
tax12_SORBI gtgggaagctttctgacccttcaaactctcagcgtgggcaaagca---gcggcatgacaa
tax13_WHEAT gcgggaggccctccgatccttcgaactcacaccaagggcaaagca---gcagcatgtcac
tax14_MAIZE -----gg-----------caaactcccggcagcgggggcaaagcagcggcggcacgacga
############################################# ############
4990 5000 5010 5020 5030 5040
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax2_SATIVA ggaatca---------------cagcatctccgcctccc---------ggcacatcgagg
tax3_ORYNI ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax4_ORYRU ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax5_SORBI ggaacca---------------caacatccctgcgtccc---------agggttttgcag
tax6_ORYME ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax7_ORYGU ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax8_ORYBA ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax9_ORYLO ggaacca---------------caacaccgctgcctccc---------agggcttcccgg
tax10_WHEAT ggaaccaccaccaccacaacgccgccgccgccgcctcctcccacggtggtggcttcccgg
tax11_HORVU ggaaccaccaccaccacag---caaccctgcggcctcctcccatggtggcggcttcccgg
tax12_SORBI gaaacct---------------cagctctccggcatcac---------gccatatccaag
tax13_WHEAT agaaccg---------------cagcgcccacgctgcac------atcggcacatccaga
tax14_MAIZE gaaacca---------------------------------------------------ag
####### ############### ######
5050 5060 5070 5080 5090 5100
=========+=========+=========+=========+=========+=========+
tax1_SATIVA atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax2_SATIVA acggcct---ctcccagatgccccatgacatc---tccggt-------------------
tax3_ORYNI atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax4_ORYRU atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax5_SORBI atgagct---ctccgagatgtcccactctattcagcagggg-------------------
tax6_ORYME atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax7_ORYGU atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax8_ORYBA atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax9_ORYLO atgagct---ctcccagatgtcccagtccatc---caggga-------------------
tax10_WHEAT acgacct---ctcccagatgtcccactccatgcagcagggc-------------------
tax11_HORVU acgacct---ctcccagatgtcccactccatgcagcagggc-------------------
tax12_SORBI acgagct---ctcccagatgccccacgacatg---ccaggc-------------------
tax13_WHEAT gcgagct---ctccccgatgacccacgacatg---ccggga-------------------
tax14_MAIZE acgagctgcccccgcggatgccccacgacatg---gcaggccagggccagcagcagcagc
####### ######################
5110 5120 5130 5140 5150 5160
=========+=========+=========+=========+=========+=========+
tax1_SATIVA --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax2_SATIVA --caggtgagcttcgcatacaacgggct---cgccgc-----------------------
tax3_ORYNI --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax4_ORYRU --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax5_SORBI --caggtaacctttgcatacaatgggctgtcgacggc-----------------------
tax6_ORYME --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax7_ORYGU --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax8_ORYBA --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax9_ORYLO --caggtgagcttcgcatacaacgggct---gacctc-----------------------
tax10_WHEAT --caggtgaccttcgccgggtacggcgcgctgccctc---------------ccagcagc
tax11_HORVU --caggtgaccttcgccggctacggcgcgctgccctcccagtcccagcagcaccagcacc
tax12_SORBI --caggtgagctttgcttacaatgggctccccac--------------------------
tax13_WHEAT --caggtgagcttcgcgtacaacggcagcgggatggc---------cgcgcaccaccagc
tax14_MAIZE agcaggtgagcttcgcttacgctgggctccccgcgca-----------------------
##########################
5170 5180 5190 5200 5210 5220
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax2_SATIVA -gcatcacagcatcgcgatggcgcaccaccaccaacc---tgacctcattggcaccggtg
tax3_ORYNI -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax4_ORYRU -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax5_SORBI -acaccacagcctcgcttcgtcgcagcaccaccagcaggcagggccaatgagtggcattg
tax6_ORYME -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax7_ORYGU -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax8_ORYBA -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax9_ORYLO -gcagcacaacattgcatcaccacatcatcagcacca---gcaggtcggcggtgttggta
tax10_WHEAT agcacggcagcatggcgtcgccgcagcaccaccacca---ccatcacgtcggcgtcggcg
tax11_HORVU agcacagcagcatggcgtcgccgcagcacccccatcatcagcatcacgtcggcgctgccg
tax12_SORBI -acaccacggtcttgcgctgtcacacccc---cagcaagctgaagcagtcagcgccggca
tax13_WHEAT accaccacggcattgcactgtcgcatccccatcagca------ggtcgaaggcgcgagcg
tax14_MAIZE -ccaccacggcctcgcgctgtcgcacccccagcagcaagcggaagcggtcagc-------
################################### ####################
5230 5240 5250 5260 5270 5280
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax2_SATIVA gtgcc---------------gcgaatgctggcggtgtctcactcacccttggccttcacc
tax3_ORYNI tcgga---------------ggcagcaatggcggtgtctccctcacccttggtcttcacc
tax4_ORYRU tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax5_SORBI gtggt---------------gcggggaacggtggcgtctccctcacccttggcctccacc
tax6_ORYME tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax7_ORYGU tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax8_ORYBA tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax9_ORYLO tcgga---------------ggcggcaatggcggtgtctccctcacccttggtcttcacc
tax10_WHEAT tcggcggggcggtgaatgctggcggcggtggcggcgtgtcgctcaccctcggcctccacc
tax11_HORVU gggcg---------------ggtaacggcggcggcgtgtcgctcaccctcggcctccacc
tax12_SORBI ttggccttggcggcgtggctgccggcggtggcggcgtttccctcacactcggccttcacc
tax13_WHEAT gcgcc---------------gggagcagcggcggcgtctccctcaccctcggcctccacc
tax14_MAIZE --------------------gccgtcggcggtggcgtttcgctcacgctgggccttcacc
### ########################################
5290 5300 5310 5320 5330 5340
=========+=========+=========+=========+=========+=========+
tax1_SATIVA agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax2_SATIVA agaacaataaccgagcttacattgctgagccccttccggccgcgcttccgctcaatcttg
tax3_ORYNI agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax4_ORYRU agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax5_SORBI agaacaaca---gagtctgtattgccgagccactcccggagtccctccctcccaacctcg
tax6_ORYME agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax7_ORYGU agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax8_ORYBA agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax9_ORYLO agaacaaca---gggtctgcatcgccgagcctctcccggctgctctcccggccaacctag
tax10_WHEAT agaacaaca---gggtctgcttcggggagccgctgccggc------------caacctgg
tax11_HORVU agaacaaca---gggtctgcttcggggagccgctgccggc------------caacctcg
tax12_SORBI agaacaaca---ggacttacattgccgagccacttccggccgcgctcccgctcaacctcc
tax13_WHEAT agaacaacc---gggcctacatcgccgagcccctcccggcggcgctcccgctcaacctcg
tax14_MAIZE agaacaacaaccggacctacgtcgccgagcctctcccggccgcgctcccg----------
######### ################################################
5350 5360 5370 5380 5390 5400
=========+=========+=========+=========+=========+=========+
tax1_SATIVA ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax2_SATIVA cccatcgtttcggactggaggacgtt---agtgatgcctacgtgat------gagctcat
tax3_ORYNI ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax4_ORYRU ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax5_SORBI ctcaccgttttgggctggaggaggtc---agcgacccctacatgat------gggctctt
tax6_ORYME ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax7_ORYGU ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax8_ORYBA ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax9_ORYLO ctcaccgtttcggactggaggaagtc---agtgacgcctatgtgat------gagctcat
tax10_WHEAT cgcaccggttcgggctggaggacgtcgtcagcgacccctacgtgat------gggctcgt
tax11_HORVU cgcaccggttcgggctggaggacgtcgtgagcgacccctacgtgat------gggctcct
tax12_SORBI cgcaccgttttgggctggaggacgtg---agcgacgcctacgtgat------ggggtcat
tax13_WHEAT cgcaccggttcgggctggaggacgtc---agcgacgcctacgcgat------ggcggcct
tax14_MAIZE --caccgtttcgggctggaggacgtg---agcgacgcctacgtgatgcaggggacgacgt
########################## #################
5410 5420 5430 5440 5450 5460
=========+=========+=========+=========+=========+=========+
tax1_SATIVA t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg
tax2_SATIVA t---tggtggtcaggaccggcatttcaccaaggagatcggtggccat---ttgctccatg
tax3_ORYNI t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg
tax4_ORYRU t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgctgcatg
tax5_SORBI t---cggaaaccaggaccggcatttcggcaaggagatgggtggccat---ttggtgcatg
tax6_ORYME t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct-----
tax7_ORYGU t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct-----
tax8_ORYBA t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct-----
tax9_ORYLO t---tggaggtcaggaccggcatttcgggaaggagattggtggtcac---ttgct-----
tax10_WHEAT t---cggcggccaggaccggcacttcgccaaggagatcggcggccac---ctcctccatg
tax11_HORVU tcggcggcggccaggaccggcacttcgccaaggagatcggcggccac---ctgctccacg
tax12_SORBI tcggcggcggccaggaccgtcatttcaccaagggaataggtggccaccatttgctccatg
tax13_WHEAT cgttcggaggccaggaccggcacttcaccaaggaaatgggcggccat---ctgctccatg
tax14_MAIZE cgttcggcggccaggaccgccatttcggcaaggggatgggcggccaccattttgtgcatg
###########################################
5470 5480 5490 5500 5510 5520
=========+=========+=========+=========+=========+=========+
tax1_SATIVA attttgtcgggtgattgtggc---------------------------------------
tax2_SATIVA actttgttggttgaagagcag---------------------------------------
tax3_ORYNI attttgtcgggtgattgtggc---------------------------------------
tax4_ORYRU attttgtcgggtgattgtggc---------------------------------------
tax5_SORBI actttgttggctga----------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT atttcgtcgggtgatcgacgc-----------cgccggtgctcagctcgctccccgctga
tax11_HORVU atttcgtcgggtgaccgatgctcagctcagctcagctccgctcggcgcgctccacgctga
tax12_SORBI actttgttggttgatctcgta---------------------------------------
tax13_WHEAT acttcgttgggtgatcgatga---------------------------------------
tax14_MAIZE acttggtcggctgatctcgtt---------------------------------------
5530 5540 5550 5560 5570 5580
=========+=========+=========+=========+=========+=========+
tax1_SATIVA -------------------------------------------------------tgctg
tax2_SATIVA --------------------------------------------atat---gattgtttc
tax3_ORYNI -------------------------------------------------------tgctg
tax4_ORYRU -------------------------------------------------------tgctg
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT tgcacattgttgtaatgtacgcacgctacgcactgctagtatgctag----gatggtata
tax11_HORVU tgcacattgttgtaatgtacgcact-----tactgctgataatcctag---gctggtata
tax12_SORBI ---ttggaagtgtgttgtcagcatgcat----gtattgtattattagg---ggta-----
tax13_WHEAT ----------------acaaacacatgcatgattgctccattgctgggatcatcagcatg
tax14_MAIZE ---cttgcgac-tgttgtcggcatgcattgtatcatactattgttagg---ggcagcaca
5590 5600 5610 5620 5630 5640
=========+=========+=========+=========+=========+=========+
tax1_SATIVA cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtatat
tax2_SATIVA accaaggagatcggtggtgattattgtaggatgcagatgtatgatctacctatattgtag
tax3_ORYNI cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtat--
tax4_ORYRU cctcaggttgctggtgatgcacttgtaatgtactgctagtatgatgttaggatggtat--
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT tagtaagtcaatcatcacaatcacttggcggcttggctcgatgatcggtcgacatgaaca
tax11_HORVU t---aagtcgatcatgaaaatcacttggcggcttggcttgacgatcgg-catgaagaaca
tax12_SORBI -----ggacagtcgaagagaccatttaatttggtcgtccatgcatccaagaatgctgtcg
tax13_WHEAT caacaacatgcagatgagatcttgtatgctggccacgtgtattgtactagaagtaggatg
tax14_MAIZE ggcacgcacagtggaagagacca-----------------------------------ga
5650 5660 5670 5680 5690 5700
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aagtcaatcacttggcgacatggcttgatgatcagtctgaatcaatttgttcggagggtg
tax2_SATIVA ttggaagtaggaggt-------------------------------------gaagaaaa
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT cggtcgattcctttg-------------------------------------gagggcgg
tax11_HORVU cggtcgattcctttg-------------------------------------gagggcgg
tax12_SORBI atatttgacaatg-----------------------------------------tgaggg
tax13_WHEAT atgaaggtaacaagg-------------------------------------gtgcattg
tax14_MAIZE atatttgacagtgtg-------------------------------------gatgaggg
5710 5720 5730 5740 5750 5760
=========+=========+=========+=========+=========+=========+
tax1_SATIVA aaaaaacattgatcttcccttcatgtagatccaggtatgctgtcaaatatttgacacctt
tax2_SATIVA gaggggcattggcacgcctgtcgtagatccacgaatgcttgtcgatattt----------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT atgaaacattgacatgccctc---------------------------------------
tax11_HORVU atgaaacattgacatgccc-----------------------------------------
tax12_SORBI ctatagagggcatg------acataccgttgaagatctgttccagttgt-----------
tax13_WHEAT gtacaccgtacatatgcttctcgtgtagaccctggaatgctgtcaatatttgacagagtg
tax14_MAIZE ctatagagggcacgcatggcccgtagcgttgaagatctgttccagttgt-----------
5770 5780 5790 5800 5810 5820
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gcgggctatagagagattgacaataccttcccaaggcagtaaagttgtgtaccatttgtt
tax2_SATIVA ----------gacattgtggggctatagagagcatatgactatacctttgaagacctgtt
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ------------------------------------------------------------
tax12_SORBI --------------------------------------------------------atgt
tax13_WHEAT gggctacatagagagcatgcagtgcagagagaagtactacctttaaaaggcctgttgtag
tax14_MAIZE --------------------------------------------------------atgt
5830 5840 5850 5860 5870 5880
=========+=========+=========+=========+=========+=========+
tax1_SATIVA atatgcttagattaatccttgtactgtgatgacgaaatgggcttagctggcagagaaaaa
tax2_SATIVA tgtagtgttgttccctatttgttctg----------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------tctcccatgtacta----------------------------------
tax11_HORVU ------------tcacatgtgtactc----------------------------------
tax12_SORBI tgtagagttgaaccctatttgttcta----------------------------------
tax13_WHEAT catgcagttcttccctatttgttctg----------------------------------
tax14_MAIZE agagttgatgagccctatttgttcta----------------------------------
5890 5900 5910 5920 5930 5940
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gaagctgatgttatggccaaaaagtgaggtgatcctaccaaatgtactaaagtagctgaa
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ------------------------------------------------------------
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
5950 5960 5970 5980 5990 6000
=========+=========+=========+=========+=========+=========+
tax1_SATIVA gcttcaatttgtcgctgtagaataagacctgctaggatttatctttcagcctgttttgtt
tax2_SATIVA ------------------------------------------------------------
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ------------------------------------------------------------
tax11_HORVU ------------------------------------------------------------
tax12_SORBI ------------------------------------------------------------
tax13_WHEAT ------------------------------------------------------------
tax14_MAIZE ------------------------------------------------------------
6010 6020 6030 6040 6050 6060
=========+=========+=========+=========+=========+=========+
tax1_SATIVA agcctttctgccttctttgggtgagcagtattaaactaagttagtagacttttttctaag
tax2_SATIVA ---------------------------atccgcggttaagccgtgttaaccctgtactat
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT ---------------------------gatccaa--------------------------
tax11_HORVU ---------------------------ctactag--------------------------
tax12_SORBI ---------------------------atcccaggtgatcgattaagcggtgttaacaca
tax13_WHEAT ---------------------------atcctagattaag--------------------
tax14_MAIZE ---------------------------atcccagctggccaagtcg--tgtgttgacaca
6070 6080 6090 6100 6110 6120
=========+=========+=========+=========+=========+=========+
tax1_SATIVA tatgtcttgtatccttagacgggggtagcctcctaaagcttggacaaaccatgatttgac
tax2_SATIVA tcatctgacttgcaaatgtggttgctcccactctggcaaataaagggtgctcagttaatt
tax3_ORYNI ------------------------------------------------------------
tax4_ORYRU ------------------------------------------------------------
tax5_SORBI ------------------------------------------------------------
tax6_ORYME ------------------------------------------------------------
tax7_ORYGU ------------------------------------------------------------
tax8_ORYBA ------------------------------------------------------------
tax9_ORYLO ------------------------------------------------------------
tax10_WHEAT aattcaaacagctgtccaacattgctctcaaataaaaaaaaaaaaaaaaaaaaaaaaaaa
tax11_HORVU ------------------------------------------------------------
tax12_SORBI ttattgtaccacta--cccctttgacatgcgattgatgtgaaggttaattgaaaacag--
tax13_WHEAT ----------------ctcccttattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa--
tax14_MAIZE ----tgtaccactatttttctctgacatgaaattgtgaagtggagt--ttggaaacagtg
6130 6140 6150
=========+=========+=========+=========
tax1_SATIVA catttgttaacctctaactggcctctgttacactaataa
tax2_SATIVA tgtcgccagcaaga-------------------------
tax3_ORYNI ---------------------------------------
tax4_ORYRU ---------------------------------------
tax5_SORBI ---------------------------------------
tax6_ORYME ---------------------------------------
tax7_ORYGU ---------------------------------------
tax8_ORYBA ---------------------------------------
tax9_ORYLO ---------------------------------------
tax10_WHEAT aaaa-----------------------------------
tax11_HORVU ---------------------------------------
tax12_SORBI ---------tgctcctggaggttgagatggttttccaca
tax13_WHEAT ---------------------------------------
tax14_MAIZE gctagttcttgctcctgaaggctg---------------
Parameters used Minimum Number Of Sequences For A Conserved Position: 8 Minimum Number Of Sequences For A Flanking Position: 12 Maximum Number Of Contiguous Nonconserved Positions: 8 Minimum Length Of A Block: 10 Allowed Gap Positions: With Half Use Similarity Matrices: Yes
Flank positions of the 16 selected block(s) Flanks: [4740 4816] [4820 4835] [4839 4856] [4860 4894] [4913 4965] [4969 4987] [5003 5017] [5035 5047] [5051 5072] [5103 5128] [5163 5197] [5201 5223] [5241 5289] [5293 5366] [5370 5386] [5405 5447] New number of positions in /work/galaxy/database/files/009/dataset_9346.dat-gb: 535 (8% of the original 6159 positions)